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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50655.1
DDBJ      :             protein of unknown function DUF421
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  126/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:229 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   94->212 3c6fD PDBj 4e-21 34.5 %
:RPS:PDB   94->227 3c6fA PDBj 3e-24 31.3 %
:RPS:PFM   88->156 PF04239 * DUF421 2e-19 58.0 %
:RPS:PFM   168->227 PF04239 * DUF421 5e-07 38.3 %
:HMM:PFM   87->163 PF04239 * DUF421 1.3e-31 55.3 76/99  
:HMM:PFM   169->227 PF04239 * DUF421 2.5e-14 39.0 59/99  
:HMM:PFM   63->84 PF04971 * Lysis_S 0.00016 52.4 21/68  
:BLT:SWISS 6->229 YDFS_BACSU 6e-44 47.1 %
:TM
:REPEAT 2|92->151|168->227
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50655.1 GT:GENE ABO50655.1 GT:PRODUCT protein of unknown function DUF421 GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2337278..2337967) GB:FROM 2337278 GB:TO 2337967 GB:DIRECTION - GB:PRODUCT protein of unknown function DUF421 GB:NOTE PFAM: protein of unknown function DUF421 KEGG: chy:CHY_2581 hypothetical protein GB:PROTEIN_ID ABO50655.1 GB:DB_XREF GI:134052684 InterPro:IPR007353 LENGTH 229 SQ:AASEQ MSPIWEIALRSIGAFFALLVITRIVGKEQLGQLTVSDFANAIAIGSIAASMATDHKENVNYYIIGIIIFGSLTYLTNLISLKYRPARKMLEGEPTVMIHNGKVLEKNMSKERYSMDNLTMQLREKNIFNIADVEFAVLEPNGRLSVLLKSNKQPLTASDLKISTNYIGIPSELIVDGKLIKQNLTQNNLSEQWLMDQLKKQGIHNVNEVTYASLDTSGNLFVDKKQDDL GT:EXON 1|1-229:0| BL:SWS:NREP 1 BL:SWS:REP 6->229|YDFS_BACSU|6e-44|47.1|223/235| TM:NTM 3 TM:REGION 3->25| TM:REGION 34->55| TM:REGION 61->82| NREPEAT 1 REPEAT 2|92->151|168->227| SEG 39->52|anaiaigsiaasma| BL:PDB:NREP 1 BL:PDB:REP 94->212|3c6fD|4e-21|34.5|119/138| RP:PDB:NREP 1 RP:PDB:REP 94->227|3c6fA|3e-24|31.3|134/137| RP:PFM:NREP 2 RP:PFM:REP 88->156|PF04239|2e-19|58.0|69/80|DUF421| RP:PFM:REP 168->227|PF04239|5e-07|38.3|60/80|DUF421| HM:PFM:NREP 3 HM:PFM:REP 87->163|PF04239|1.3e-31|55.3|76/99|DUF421| HM:PFM:REP 169->227|PF04239|2.5e-14|39.0|59/99|DUF421| HM:PFM:REP 63->84|PF04971|0.00016|52.4|21/68|Lysis_S| OP:NHOMO 306 OP:NHOMOORG 129 OP:PATTERN ----------------------------------------------1-----1--------------- -------1-------------------------------1-------------------------1------------1---------------------1-11-----1--------------------------------------1------------------111---------------------13444444667349576849662574622163--------44---------------------11-11-----111111---11-----------11-111111-1-1--------------1---------24253222335313131222111121--2--2133352342111111-11--------------------------------------------------------------------1----------------------------------------------------------------------------------------1---------------------1-------------1------------1--------------------1--------------------------------------------------------------1---------------1-------------------------------------1----------------------------------------------------------------------------------------1----1-------------------------------1----------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 134 STR:RPRED 58.5 SQ:SECSTR #############################################################################################cEEEEETTEEcHHHHHHTTccHHHHHHHHHHTTcccGGGEEEEEEcTTccEEEEEcGGGccccTTTTTcccccccccEEEEETTEEcHHHHHHHcccHHHHHHHHHHTTcccGGGEEEEEEcTTcccEEEETTT## DISOP:02AL 1-1,153-154,156-160,228-230| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHccccHHHHHHHHHHcccccHHHEEEEEEEccccEEEEEccccccccHHHHcccccccccEEEEEEccHHHHHHHHHccccHHHHHHHHHHcccccHHHEEEEEEEccccEEEEEEcccc //