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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50668.1
DDBJ      :             biotin synthase
Swiss-Prot:             

Homologs  Archaea  16/68 : Bacteria  332/915 : Eukaryota  31/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:354 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->337 3cixA PDBj 1e-87 49.8 %
:RPS:PDB   6->344 3cixA PDBj 3e-36 45.1 %
:RPS:SCOP  16->297 1r30A  c.1.28.1 * 4e-52 24.0 %
:HMM:SCOP  15->339 1r30A_ c.1.28.1 * 1.1e-64 33.4 %
:RPS:PFM   87->212 PF04055 * Radical_SAM 7e-08 30.6 %
:HMM:PFM   60->220 PF04055 * Radical_SAM 2.1e-23 26.2 160/166  
:HMM:PFM   234->297 PF06968 * BATS 1.2e-07 30.2 63/92  
:BLT:SWISS 15->295 BIOB_COREF 4e-20 30.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50668.1 GT:GENE ABO50668.1 GT:PRODUCT biotin synthase GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2356312..2357376) GB:FROM 2356312 GB:TO 2357376 GB:DIRECTION - GB:PRODUCT biotin synthase GB:NOTE PFAM: Radical SAM domain protein SMART: Elongator protein 3/MiaB/NifB KEGG: mta:Moth_1735 radical SAM GB:PROTEIN_ID ABO50668.1 GB:DB_XREF GI:134052697 InterPro:IPR006638 InterPro:IPR007197 LENGTH 354 SQ:AASEQ MQDNFFKALTKAAAGNELTRQDVITLLGALPGDEETKLFDMADQVRKKHFGDEVHLRGIIEFSNYCRNDCHYCGLRRSNKDIERYRIPIEEIVETAKYAAQLGYGTIVLQSGEDSRYSGEDLAEIIRQVKKVGNFAVTICVGERSREDYELMKKAGADRYLLKHETADSGLFTQLRPGTTLKERIKGLTWLKELGYQVGSGNIVGLPGQTMETLADDILLLRALDVEMAGIGPFIPHQQTPLRDSKTGDLALTLKTLAVARLILPQTHLPATTAVGTLHPDGRKMALRCGANVIMPNLSPASYREKYQIYPEKAGSKENADESHEKITSLVKEMGRRISTGQGHSPKDKFKDER GT:EXON 1|1-354:0| BL:SWS:NREP 1 BL:SWS:REP 15->295|BIOB_COREF|4e-20|30.2|275/334| SEG 214->225|laddilllrald| BL:PDB:NREP 1 BL:PDB:REP 17->337|3cixA|1e-87|49.8|319/345| RP:PDB:NREP 1 RP:PDB:REP 6->344|3cixA|3e-36|45.1|337/345| RP:PFM:NREP 1 RP:PFM:REP 87->212|PF04055|7e-08|30.6|124/164|Radical_SAM| HM:PFM:NREP 2 HM:PFM:REP 60->220|PF04055|2.1e-23|26.2|160/166|Radical_SAM| HM:PFM:REP 234->297|PF06968|1.2e-07|30.2|63/92|BATS| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| RP:SCP:NREP 1 RP:SCP:REP 16->297|1r30A|4e-52|24.0|275/314|c.1.28.1| HM:SCP:REP 15->339|1r30A_|1.1e-64|33.4|302/312|c.1.28.1|1/1|Radical SAM enzymes| OP:NHOMO 531 OP:NHOMOORG 379 OP:PATTERN --------------------------------1--11111111-----111111-------------2 -1--112111111111111-11111111111111111111--11---1--------1---11-11----------------2---1113222--22----1---------------------------1-1---------------1111111------------1---11-------------------1-11-----11-1-1-111-111-1--111-1---------1--111111111111111111------------------------------1----------------------------------------4434333333332322233244323231322-31132532-232123211-11--------------------------------1-------------------------------------------------------------------------------------------1----------------------------------1111------1-----------2-----------1--1214--2335221-1-1----6211-1--35----1---11-----------------1122--1211--------111--12----1---1----1----1111-2-1111111111-1111111111111111111111111212222222211222222-11111111-111111111111---111111----1----1-----------11-11111111--1-111111111111-1-------------------------------------------12111111------------------------------------2222222233--1 -----------------1-11--1---11----1---------111-----1-111-11-------------------------------21-1--1111---------2------------------------------------------------1--------------1--11-----2----11--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 339 STR:RPRED 95.8 SQ:SECSTR #####HHHHHHHHHTTcccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccEEEEEEEEEEEcccccccTTcTTcTTccccccccccHHHHHHHHHHHHHTTccEEEEEEcccGGGTTHHHHHHHHHHHTTcTcEEEEEcccccHHHHHHHHHTTccEEEcccccccHHHHHHHcTTccHHHHHHHHHHHHTTcEEEEcccEEccTTccHHHHHHHHHHHHHHTccEEccEEccccTTcTTTTcccccHHHHHHHHHHHHHHcTTccccccHHHHHHcTTHHHHHHTTTccEEccccccTTTGGGcccccccTTTTccTTcHHHHHHHHHHHTTcEEcccccc########## DISOP:02AL 1-1,347-355| PSIPRED ccHHHHHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHccccEEEEEHHcccHHHHHHHcccccHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHHHHccccEEEEEEEEccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHccHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccHHHHHHccc //