[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50753.1
DDBJ      :             Extracellular ligand-binding receptor
Swiss-Prot:             

Homologs  Archaea  21/68 : Bacteria  461/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.93.1
:394 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   35->368 2lbpA PDBj 1e-31 27.7 %
:RPS:PDB   39->387 3eafA PDBj 5e-46 16.5 %
:RPS:SCOP  37->377 1usgA  c.93.1.1 * 2e-67 25.4 %
:HMM:SCOP  38->389 1qo0A_ c.93.1.1 * 1.4e-94 40.0 %
:RPS:PFM   59->369 PF01094 * ANF_receptor 4e-44 38.9 %
:HMM:PFM   59->372 PF01094 * ANF_receptor 2.6e-32 22.6 305/348  
:BLT:SWISS 38->387 LIVB3_BRUME 5e-36 30.4 %
:PROS 281->305|PS00583|PFKB_KINASES_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50753.1 GT:GENE ABO50753.1 GT:PRODUCT Extracellular ligand-binding receptor GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2448829..2450013) GB:FROM 2448829 GB:TO 2450013 GB:DIRECTION - GB:PRODUCT Extracellular ligand-binding receptor GB:NOTE PFAM: Extracellular ligand-binding receptor KEGG: chy:CHY_2238 high affinity branched-chain amino acid ABC transporter, amino acid-binding protein GB:PROTEIN_ID ABO50753.1 GB:DB_XREF GI:134052782 InterPro:IPR000437 InterPro:IPR000709 InterPro:IPR001828 InterPro:IPR002173 LENGTH 394 SQ:AASEQ MKKHFRLAALLVALVMLAGLVSGCGGGGEEKKAADANEIVIGGNLELSGPVATFGTAMKNGAEMYFEEVNAAGGVLGKKIKFNVMDNKSDATEAANVATRLITQDKVVAVMGAATSGNTMGFMQVATDNKVPIITPSGTALEVTVDPNTKKVRDYVFRTCFIDPFQGIVMANFATNDLKAKTAVLYVDNQSPYAKGLAQFFKDSFIKQGGKIVGEEAFMPEDQDFKATLTKIKGLNPDVIYVPAYYEPVGKIVKQGREIGITVPFLGGDGWDSPKLPEIAGGAALNNTYFSNHYSSQKDDPEIKGFVEKYQAKFGQVPDTFAALGYDTAVLLVDAIKRSEDASPEKIKEALANAKDVQAITGKLSFDENHNPIKGAVILEMKDGKQVYKTYVQP GT:EXON 1|1-394:0| BL:SWS:NREP 1 BL:SWS:REP 38->387|LIVB3_BRUME|5e-36|30.4|339/368| PROS 281->305|PS00583|PFKB_KINASES_1|PDOC00504| TM:NTM 1 TM:REGION 4->25| SEG 7->21|laallvalvmlaglv| SEG 23->28|gcgggg| BL:PDB:NREP 1 BL:PDB:REP 35->368|2lbpA|1e-31|27.7|321/346| RP:PDB:NREP 1 RP:PDB:REP 39->387|3eafA|5e-46|16.5|339/379| RP:PFM:NREP 1 RP:PFM:REP 59->369|PF01094|4e-44|38.9|301/319|ANF_receptor| HM:PFM:NREP 1 HM:PFM:REP 59->372|PF01094|2.6e-32|22.6|305/348|ANF_receptor| RP:SCP:NREP 1 RP:SCP:REP 37->377|1usgA|2e-67|25.4|331/345|c.93.1.1| HM:SCP:REP 38->389|1qo0A_|1.4e-94|40.0|340/0|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 1733 OP:NHOMOORG 486 OP:PATTERN 22-2-1----------2-1222212--12-12----1--------1-3-----------1----1--- --1-3--1111---1------2---4------22221233233311---11-111--111335-112121422222111---3--------------------------------------------1-11--31-22244---4543253331222----1-3-212141------------8542211----11111------------------1-4311--------42------------------------11-----11--11---11----1-11---11111111111111-------------1111111111221-41111111-1---11----2-1--5--63223372-111---211211------1111-3PMI316F9JMF56575663656-45C53G5C331-A333345734348F1--4251322314--------7----726-----------------------------2--1--BJECFDDGCHE46665DDIC777757DEJAFBA-399AA2556BGH9DQ558----43----------9BI1D8322834D644623333153123333321E1--1-222222----------21----11121------------------1--1-1--------------3131-412222222222-22222222222222222224441111-2222222222212121322222221-111111111111-------------11213---------------------1-1-2-22222322222231222----------------------11----------------1---------------1---------------------------312--14111-3- --------------------------------------------------------------------------------------------------------------------------------------------------------------2----2---------------------1--3---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 356 STR:RPRED 90.4 SQ:SECSTR ###############################cEEEccEEEEEEEEccccTTHHHHHHHHHHHHHHHHHHHHHcEEcccEEEEEEEEcTTcHHHHHHHHHHHHHTTcccEEEEEccHHHHHHHHHHHHHHTcEEEEccccGGGTTcccccTTTcTTEEcccccHHHHHHHHHHHHHHHHccEEEEEEEcTTcHHHHTTHHHHHHHTGGGTEEEEEEEEccTTcHHHHHHHHHHHTTcccEEEEcccHHHHHHHHHHHHHHTcccEEEEcGGGccTTHHHHHcGGGTTcEEEEEccGGcTTcHHHHHHHHHHHTTccGGccHHHHHHHHHHHHHHHHHTTHHHHTHHHHHHHHHHccccTTccccccccTcccccccEEEEEEcTTccE####### DISOP:02AL 1-6| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEcccccHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHcccEEEEEccccHHHcccccccccccEEEEcccccHHHHHHHHHHHHHHcccEEEEEEEEccccHHHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHccEEEEEEEcccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccEEEEEEcccccccccEEEEEEEccEEEEEEEEcc //