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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50791.1
DDBJ      :             N-acetylmuramoyl-L-alanine amidase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  571/915 : Eukaryota  1/199 : Viruses  2/175   --->[See Alignment]
c.56.5
:253 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->181 1jwqA PDBj 6e-19 35.5 %
:RPS:PDB   4->163 3czxA PDBj 6e-38 24.5 %
:RPS:SCOP  4->181 1jwqA  c.56.5.6 * 8e-46 36.3 %
:HMM:SCOP  3->184 1xovA2 c.56.5.6 * 2.2e-54 45.5 %
:RPS:PFM   6->177 PF01520 * Amidase_3 7e-34 42.1 %
:HMM:PFM   6->176 PF01520 * Amidase_3 1.1e-52 44.0 168/175  
:BLT:SWISS 6->181 CWLM_BACLI 4e-41 51.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50791.1 GT:GENE ABO50791.1 GT:PRODUCT N-acetylmuramoyl-L-alanine amidase GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 2495410..2496171 GB:FROM 2495410 GB:TO 2496171 GB:DIRECTION + GB:PRODUCT N-acetylmuramoyl-L-alanine amidase GB:NOTE PFAM: cell wall hydrolase/autolysin KEGG: bce:BC2207 sporulation-specific N-acetylmuramoyl-L-alanine amidase GB:PROTEIN_ID ABO50791.1 GB:DB_XREF GI:134052820 InterPro:IPR002508 LENGTH 253 SQ:AASEQ MTRKIICLDPGHGGQDPGALGNGLQEKDITLEIAKKIIQRLAAYDVTVKSTRDSDTFVSLSQRAAYANNVNADYFVSIHINAGGGTGFESFIYNGEVSSTTIKTRQVLHDTIMADMQKYYMIDRGKKAANFAVIRETNMPAILTENLFIDNPKDASLLKNTDFINDLSTAITHGLVKGLNLTPLTIIPNPTPAPLPTKPPVTPQPPVWNPQAEIQQLIDTGLLANNHPADEHITWGEFATVINRLLYIIKNKS GT:EXON 1|1-253:0| BL:SWS:NREP 1 BL:SWS:REP 6->181|CWLM_BACLI|4e-41|51.2|172/253| SEG 182->211|tpltiipnptpaplptkppvtpqppvwnpq| BL:PDB:NREP 1 BL:PDB:REP 4->181|1jwqA|6e-19|35.5|169/179| RP:PDB:NREP 1 RP:PDB:REP 4->163|3czxA|6e-38|24.5|155/178| RP:PFM:NREP 1 RP:PFM:REP 6->177|PF01520|7e-34|42.1|171/175|Amidase_3| HM:PFM:NREP 1 HM:PFM:REP 6->176|PF01520|1.1e-52|44.0|168/175|Amidase_3| GO:PFM:NREP 2 GO:PFM GO:0008745|"GO:N-acetylmuramoyl-L-alanine amidase activity"|PF01520|IPR002508| GO:PFM GO:0009253|"GO:peptidoglycan catabolic process"|PF01520|IPR002508| RP:SCP:NREP 1 RP:SCP:REP 4->181|1jwqA|8e-46|36.3|171/179|c.56.5.6| HM:SCP:REP 3->184|1xovA2|2.2e-54|45.5|176/0|c.56.5.6|1/1|Zn-dependent exopeptidases| OP:NHOMO 928 OP:NHOMOORG 576 OP:PATTERN ----------------------------------------------------1----1---------- 111-1------------12-11111-1111111111-1--1-------------------11---1--------------1-1-1111111141111--1--221-2211111111111111111111-1-1111-----------323233311331111-12322444111111111111122211112-243434432323332326755452343242612322222421111-111111111111111--1-11-1---11--11111112--------------------------------------11---1111375-45546A5646355222---455--3424355584225421113-1121-1111111-11-111--1-----11111111111-1111111-111-------------111-1111----111--------1--11-21------------------------------1-11-11111-111--11111--11111111--1111111--111-111---1111111-11111111111111111-11-11111111111111-1-1111111111-11111111111111111111111211----11---1------111------1--1---11-1--1----22213222222222222-22223222222222222223332222222221121112222223222222221222222222222-11-11111------111111-11111-1111-----------21----1122-11111111-------------1111111111111212112221111--11----11--------11---------------------------11---1---121 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- --------------------------------------------------------------------------1------------------------------------------------------------------------------1--------------------- STR:NPRED 178 STR:RPRED 70.4 SQ:SECSTR ###ccEEEEEcccccccccEETTEEHHHHHHHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHTTccEEEEEccccTTccccEEEEcGGGHHHHHHHHHHHHHHHccccHHcTcTTEEEGGGcccTTHHHHHTTcEEEEcccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHTc######################################################################## DISOP:02AL 1-1,101-102,183-200,253-254| PSIPRED ccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHccccEEEEEEEccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHEEcccccEEEEEEEEcccHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHcccc //