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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50811.1
DDBJ      :             extracellular solute-binding protein, family 1
Swiss-Prot:             

Homologs  Archaea  19/68 : Bacteria  139/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:290 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   56->270 3cvgD PDBj 1e-11 28.5 %
:RPS:PDB   44->275 1atgA PDBj 2e-17 14.3 %
:RPS:SCOP  44->275 1atgA  c.94.1.1 * 1e-18 14.3 %
:HMM:SCOP  43->277 1twyA_ c.94.1.1 * 7e-31 28.6 %
:HMM:PFM   52->126 PF01547 * SBP_bac_1 0.00039 21.6 74/314  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50811.1 GT:GENE ABO50811.1 GT:PRODUCT extracellular solute-binding protein, family 1 GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 2515505..2516377 GB:FROM 2515505 GB:TO 2516377 GB:DIRECTION + GB:PRODUCT extracellular solute-binding protein, family 1 GB:NOTE KEGG: sfu:Sfum_0027 extracellular solute-binding protein, family 1 GB:PROTEIN_ID ABO50811.1 GB:DB_XREF GI:134052840 InterPro:IPR000437 LENGTH 290 SQ:AASEQ MKNRSLKYLALLLTMLMLVVVGCAQQQTPKEEVKKEAAEPAIKDVILATTTSTQDSGLLDVLKPEFEKKTGYNLKIIAVGTGAALKMGEKGEADVLLTHAAKSEKPLVDNGIAINYNQVMHNDFIIVGPENDPAGIKNAKATAEAMKMIADKGAVFVSRGDDSGTHKKELGLWKEAQIEPKGQKWYQESGTGMGATLNISSEKQGYTLTDRATYLAQKDKVKLAILLEGDKSLLNIYHVMNVNPKKFDKVNAEGGKAFVDFMLAKDTQEIIAKFGVEKYGQPLFFADANK GT:EXON 1|1-290:0| TM:NTM 1 TM:REGION 5->27| SEG 9->21|lallltmlmlvvv| SEG 30->43|keevkkeaaepaik| BL:PDB:NREP 1 BL:PDB:REP 56->270|3cvgD|1e-11|28.5|214/263| RP:PDB:NREP 1 RP:PDB:REP 44->275|1atgA|2e-17|14.3|223/231| HM:PFM:NREP 1 HM:PFM:REP 52->126|PF01547|0.00039|21.6|74/314|SBP_bac_1| RP:SCP:NREP 1 RP:SCP:REP 44->275|1atgA|1e-18|14.3|223/231|c.94.1.1| HM:SCP:REP 43->277|1twyA_|7e-31|28.6|224/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 199 OP:NHOMOORG 174 OP:PATTERN ---1-1----------1-11-11-1-----21--1--1------11211---1------1-------- ---------------------------------------------------------------------------------1-------------------------------------------------------------------------------------1------------------11---------------------------------------------------------------------------------------------------------------------------------------111--1111111-1--------------2--11---121-21111-12---1------------2----1-----------------111111111-------------1------1------111-------------2--------------------------------------1111------------------------11111111112-11-1111-111----------------12--1111112121222-111-11124------22-1---11111-----------1-----11---------11111-1211111111111----1-----------------------------------------------------------------------------------------------------------1-------------------------------------------------------11111111111111------------------------------------------------------------------1------ ----------------1------------1111--------11-111----2-1---11---------------------------------12--------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 247 STR:RPRED 85.2 SQ:SECSTR ###########################################cEEEEEEGGGHHHTHHHHHHHHHHHHHcccEEEEEEcHHHHHHHHHTTcccEEEccccHHHHHHHHTTcccTTccEEEccEEEEEccTTTccTTcGGGGccccccEEEEcTTTcHHHHHHHHHHHHTTcHHHHHHTTcEEcEEccHHHHHHHHHTTcccEEEEEGGGTccTTcccccEEEcccGGGTcccccEEEEEEcTTcccHHHcHHHHHHHHHHTTcHHHHHHHHHTTEHHTTEEccEEcccc DISOP:02AL 1-5,29-40,289-291| PSIPRED cccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEccccccccHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHccccEEEEccHHHHHHHHHcccccccEEEEEccEEEEEcccccccccccccHHHHHHHHHcccccEEcccccccHHHHHHHHHHHHccccccccEEEcccccHHHHHHHHHHHccEEEEEEEEEEEEcccccEEEEEcccccccccEEEEEccHHHcccccHHHHHHHHHHHccHHHHHHHHHccccccccEEccccccc //