[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50815.1
DDBJ      :             ferredoxin 2
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  87/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.96.1
:500 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->232 1fehA PDBj 5e-14 29.3 %
:BLT:PDB   352->498 2j0oA PDBj 8e-04 24.4 %
:RPS:PDB   339->485 3c3lA PDBj 3e-04 12.6 %
:RPS:SCOP  1->236 1c4aA1  c.96.1.1 * 2e-41 27.1 %
:HMM:SCOP  1->237 1hfeL1 c.96.1.1 * 2.2e-55 31.2 %
:RPS:PFM   1->226 PF02906 * Fe_hyd_lg_C 2e-20 35.4 %
:HMM:PFM   2->227 PF02906 * Fe_hyd_lg_C 6.9e-47 32.3 226/294  
:HMM:PFM   301->329 PF04060 * FeS 1.3e-06 44.8 29/35  
:BLT:SWISS 18->232 PHF1_CLOPA 2e-13 29.3 %
:BLT:SWISS 312->488 CLC4F_HUMAN 6e-05 23.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50815.1 GT:GENE ABO50815.1 GT:PRODUCT ferredoxin 2 GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2520342..2521844) GB:FROM 2520342 GB:TO 2521844 GB:DIRECTION - GB:PRODUCT ferredoxin 2 GB:NOTE KEGG: tte:TTE0697 ferredoxin 2 GB:PROTEIN_ID ABO50815.1 GB:DB_XREF GI:134052844 LENGTH 500 SQ:AASEQ MAAIVAPSYSASFALSAGKMVSSLKKLGFSSVQEVAYGAGICAREYKKYFYQVSRKQPIISTACPAVVQLVEKYFPQLLDCLAPIDSPMLIQAKIIKRVYPDYKIVFIGPCLSKKNESIDPNTSGYVDAVITFKQLEQWYNQEEMEWQQLSEEPWENPQPDIARTFPISGGLLKTSGINEDIASMEIVVVEGARHCIEVLRAIDSGEFTPRFVDMLVCEGCVMGPGMVSEKPSVVRSQLVFNTVKNNNNLPPNEEFLQKIKELTFQRTFKAKPIVKKEFTDEQVWQTLRETGKLSARDLVNCSACGYDTCWEKAVACLQGMAEKEMCLPFLLSQVPALTNSLMDMSNKLMLSMESINFSTLTLKGSTSKMNVRNQHLEGLIKETNTIAKDTLELANKVLDMVSQYQCPTNQDTGETTTLSPDLEEIKKIAAETKLQSEQATNAFADIASVLNSLREDSVMILEQEKAIKVVTNSLEQIVATYDQLLNIGSAMANIGRNYV GT:EXON 1|1-500:0| BL:SWS:NREP 2 BL:SWS:REP 18->232|PHF1_CLOPA|2e-13|29.3|215/574| BL:SWS:REP 312->488|CLC4F_HUMAN|6e-05|23.7|177/589| SEG 239->256|lvfntvknnnnlppneef| BL:PDB:NREP 2 BL:PDB:REP 18->232|1fehA|5e-14|29.3|215/574| BL:PDB:REP 352->498|2j0oA|8e-04|24.4|135/284| RP:PDB:NREP 1 RP:PDB:REP 339->485|3c3lA|3e-04|12.6|143/1089| RP:PFM:NREP 1 RP:PFM:REP 1->226|PF02906|2e-20|35.4|226/295|Fe_hyd_lg_C| HM:PFM:NREP 2 HM:PFM:REP 2->227|PF02906|6.9e-47|32.3|226/294|Fe_hyd_lg_C| HM:PFM:REP 301->329|PF04060|1.3e-06|44.8|29/35|FeS| RP:SCP:NREP 1 RP:SCP:REP 1->236|1c4aA1|2e-41|27.1|236/365|c.96.1.1| HM:SCP:REP 1->237|1hfeL1|2.2e-55|31.2|237/312|c.96.1.1|1/1|Fe-only hydrogenase| OP:NHOMO 240 OP:NHOMOORG 88 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------1--1------1111-2-----------------------------------------------1-1--------------------------------------------334------------------------------------------------------------------------------------------------------------------------------------241255555555455353333335232-22234223721841433322----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-1--4-31----111111141------12----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--------------1---------------------------3223333333--- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 379 STR:RPRED 75.8 SQ:SECSTR #############cccHHHHHHHHHHHHHHTTccHHHHHHccccTTccHHHHHHHHTcEEcHHHHHHHHHHHHHTTTcccccccHHHHHHHHHHHHHHHHHHHHccccEEEEccGGGccTTTcEEcccEEEEHHHHHHHHHHTTccGGGccccGGGTcccHHHHGGGcTTHHHHHccEEEEEEEEEEEEEEcHHHHHHHHHTTGGGcccccEEEEEccTcGGGcTTcccccH##########################################################################################################HHHHHHHHHTHHHHHHHHHHcTTcccccEEcccEEEEETTTHHHHHHHHHHHHHTTccHHHHHHHHTTccHHHHHTTccTTcccHHHHHHHHHHHccGGGGTTccHHHHHHHHHHHHHHHHHHHHHHHHHTTccEEEccEEcccccEGGGEEEccccccc## DISOP:02AL 230-234| PSIPRED cEEEEcHHHHHHHHccHHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHccHHHHHccccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHccccccccccEEEcHHHHHHHHHHccccHHHccccccccccccccccccccccEEEEEEEEccccEEEEEEEccHHHHHHHHHHHHcccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHcccccHHHHHHHHHcccccccccHHHHHHHHHHHccccHHHHccccccccccHHHHHHHHHcccccHHHccHHHHHHHHHHHHHHHHHcccccccccccccHHHHccccccccEEEHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc //