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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50828.1
DDBJ      :             TrkA-C domain protein
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  6/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.286.1f.14.1
:225 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   130->215 2bkoA PDBj 9e-08 18.6 %
:RPS:SCOP  138->213 1vctA2  d.286.1.1 * 7e-11 19.7 %
:HMM:SCOP  4->87 1lnqA2 f.14.1.1 * 0.00033 23.8 %
:HMM:SCOP  131->216 2fy8A2 d.286.1.1 * 2.7e-14 32.6 %
:HMM:PFM   150->215 PF02080 * TrkA_C 1.7e-16 30.8 65/71  
:HMM:PFM   5->83 PF02386 * TrkH 1.8e-05 22.8 79/339  
:BLT:SWISS 138->210 RIMK_RHOBA 6e-07 31.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50828.1 GT:GENE ABO50828.1 GT:PRODUCT TrkA-C domain protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2534771..2535448) GB:FROM 2534771 GB:TO 2535448 GB:DIRECTION - GB:PRODUCT TrkA-C domain protein GB:NOTE PFAM: TrkA-C domain protein KEGG: cpr:CPR_0508 TrkA domain protein GB:PROTEIN_ID ABO50828.1 GB:DB_XREF GI:134052857 InterPro:IPR006037 LENGTH 225 SQ:AASEQ MNLIFLVSFILVLFIIVEISAIALKLTGMDLHKARFQALTALVTVGYTTSESEMVVKHHVRRRIIMVLMVMGYLGTATIVSVLIELMRHPLTLIQVATAITMLLLAISIASSRKIRGSFDKGIEKQLSRHRTLQKRTVEEVLHLDRQYGVAEVKLKKNNPLVGKSIAESKIRDHELFILALEREEEFLHSPRGSQILLEEDKLIVYGRLQNIQLLLCWDCGREEI GT:EXON 1|1-225:0| BL:SWS:NREP 1 BL:SWS:REP 138->210|RIMK_RHOBA|6e-07|31.5|73/405| TM:NTM 3 TM:REGION 5->27| TM:REGION 64->86| TM:REGION 91->112| SEG 3->17|liflvsfilvlfiiv| RP:PDB:NREP 1 RP:PDB:REP 130->215|2bkoA|9e-08|18.6|86/190| HM:PFM:NREP 2 HM:PFM:REP 150->215|PF02080|1.7e-16|30.8|65/71|TrkA_C| HM:PFM:REP 5->83|PF02386|1.8e-05|22.8|79/339|TrkH| RP:SCP:NREP 1 RP:SCP:REP 138->213|1vctA2|7e-11|19.7|76/94|d.286.1.1| HM:SCP:REP 4->87|1lnqA2|0.00033|23.8|80/80|f.14.1.1|1/1|Voltage-gated potassium channels| HM:SCP:REP 131->216|2fy8A2|2.7e-14|32.6|86/0|d.286.1.1|1/1|TrkA C-terminal domain-like| OP:NHOMO 12 OP:NHOMOORG 12 OP:PATTERN -----1-----------------------------1------------------111-1--------- ---------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------111-------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 154 STR:RPRED 68.4 SQ:SECSTR #############################################################TTccEEEEccccHHHHHHHHHHHHHHccccEEEEEcccGGGHHHHHHHTccEEEcHHHHHHHHHHHHHHTTccccHHHHHHHHHcccEEEEEEccTTcTTTTccHHHHTHHHHccEEEEEEETTEEEEcccTTccccTTcEEEEEEcHHHHHHH########## DISOP:02AL 225-226| PSIPRED ccHHHHHHHHHHHHHHHHHHHEEEEEccccHHHHHHHHHHHHHHccccccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEHHHHEEccccEEEEEEEEccccccccccHHHHcccccccEEEEEEEccEEEEcccccEEEccccEEEEEccHHHHHHHHHcccccccc //