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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50842.1
DDBJ      :             RNA methyltransferase, TrmH family, group 2
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  728/915 : Eukaryota  18/199 : Viruses  0/175   --->[See Alignment]
c.116.1
:152 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->145 1mxiA PDBj 2e-32 46.9 %
:RPS:PDB   1->149 3e5yA PDBj 4e-32 44.3 %
:RPS:SCOP  1->152 1j85A  c.116.1.1 * 3e-38 44.1 %
:HMM:SCOP  1->154 1mxiA_ c.116.1.1 * 5.7e-44 40.3 %
:RPS:PFM   3->140 PF00588 * SpoU_methylase 3e-10 33.6 %
:HMM:PFM   2->140 PF00588 * SpoU_methylase 1.2e-40 37.0 138/142  
:BLT:SWISS 1->152 YGL3_BACST 3e-41 53.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50842.1 GT:GENE ABO50842.1 GT:PRODUCT RNA methyltransferase, TrmH family, group 2 GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 2548802..2549260 GB:FROM 2548802 GB:TO 2549260 GB:DIRECTION + GB:PRODUCT RNA methyltransferase, TrmH family, group 2 GB:NOTE TIGRFAM: RNA methyltransferase, TrmH family, group 2 PFAM: tRNA/rRNA methyltransferase (SpoU) KEGG: chy:CHY_1122 RNA methyltransferase, TrmH family, group 2 GB:PROTEIN_ID ABO50842.1 GB:DB_XREF GI:134052871 InterPro:IPR001537 InterPro:IPR004440 LENGTH 152 SQ:AASEQ MHIVLVEPEIPANTGNIARTCSVTGASLHLVEPLGFSTDDRYLKRAGLDYWHLLDLHYHKSFAALQQQYPEGRFWYFTTKGGRPYHEASFEENDFLVFGKETAGLPKELLAANPDNCLRIPMLGQVRSLNLSNSVAIAVYEALRQHNFPNMT GT:EXON 1|1-152:0| BL:SWS:NREP 1 BL:SWS:REP 1->152|YGL3_BACST|3e-41|53.9|152/157| SEG 48->59|ldywhlldlhyh| BL:PDB:NREP 1 BL:PDB:REP 1->145|1mxiA|2e-32|46.9|145/156| RP:PDB:NREP 1 RP:PDB:REP 1->149|3e5yA|4e-32|44.3|149/156| RP:PFM:NREP 1 RP:PFM:REP 3->140|PF00588|3e-10|33.6|137/143|SpoU_methylase| HM:PFM:NREP 1 HM:PFM:REP 2->140|PF00588|1.2e-40|37.0|138/142|SpoU_methylase| GO:PFM:NREP 3 GO:PFM GO:0003723|"GO:RNA binding"|PF00588|IPR001537| GO:PFM GO:0006396|"GO:RNA processing"|PF00588|IPR001537| GO:PFM GO:0008173|"GO:RNA methyltransferase activity"|PF00588|IPR001537| RP:SCP:NREP 1 RP:SCP:REP 1->152|1j85A|3e-38|44.1|152/156|c.116.1.1| HM:SCP:REP 1->154|1mxiA_|5.7e-44|40.3|154/156|c.116.1.1|1/1|alpha/beta knot| OP:NHOMO 757 OP:NHOMOORG 746 OP:PATTERN -------------------------------------------------------------------- -----11111111111111-111111111111111111111----11-1---111111-------11----11111111-11---1---------------11-------111111111111111---------------------1111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111112211111111111111111111111111111111111-111111111111111111-111-1111111111111111111111111111111111-11111111111-111111111111111-1-1----------------------11-----------------------------1111111111111111111111111111111111111111111111111111111111111111111111111111111--11111111111111111111----11-111-11111111-1-------1111111111111111111111111111111111111--111-1------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111----------1----1-111-111111111111111----------111 -----------------------------------------------------------------------------------------------------------1------22----------------------------------------------------------111116111-121-2-11------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 151 STR:RPRED 99.3 SQ:SECSTR cEEEEEccccHHHHHHHHHHHHHHTcEEEEEccccccccHHHHHHTTccHHHHHTcEEEccHHHHHHHHcccGGGEEccTTcEEGGGccccTTcEEEEEcTTTcccHHHHTccGGGEEEcccccccccccHHHHHHHHHHHHHHHTTTTTT# DISOP:02AL 150-153| PSIPRED cEEEEEccccccHHHHHHHHHHHccccEEEEcccccccccHHHHHHHcccccEEEEEEEccHHHHHHHHccccEEEEEEcccccHHHccccccEEEEEccccccccHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHHHccccccc //