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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50846.1
DDBJ      :             carbohydrate binding family 25
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  8/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:129 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   41->119 2c3xB PDBj 4e-06 30.1 %
:RPS:PDB   36->125 2c3vB PDBj 1e-10 24.7 %
:RPS:PFM   39->121 PF03423 * CBM_25 4e-05 41.2 %
:HMM:PFM   39->121 PF03423 * CBM_25 7.5e-12 27.7 83/87  
:BLT:SWISS 38->117 AMY_CLOAB 1e-05 36.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50846.1 GT:GENE ABO50846.1 GT:PRODUCT carbohydrate binding family 25 GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2554581..2554970) GB:FROM 2554581 GB:TO 2554970 GB:DIRECTION - GB:PRODUCT carbohydrate binding family 25 GB:NOTE KEGG: mta:Moth_1937 carbohydrate binding family 25 GB:PROTEIN_ID ABO50846.1 GB:DB_XREF GI:134052875 LENGTH 129 SQ:AASEQ MANRTNFGEPTMGAYRLKEMYEAQFPQGVVVDPTPITAGQDVVVFYDGLLAKDGAQEVYLHCGFGNLNHWNAVQDQRMAKTGYGYVKAVTMPETHTQFNFCFHDNAYNWDNNSGKNWTFQVHNGTMDGH GT:EXON 1|1-129:0| BL:SWS:NREP 1 BL:SWS:REP 38->117|AMY_CLOAB|1e-05|36.8|76/100| BL:PDB:NREP 1 BL:PDB:REP 41->119|2c3xB|4e-06|30.1|73/94| RP:PDB:NREP 1 RP:PDB:REP 36->125|2c3vB|1e-10|24.7|81/94| RP:PFM:NREP 1 RP:PFM:REP 39->121|PF03423|4e-05|41.2|80/87|CBM_25| HM:PFM:NREP 1 HM:PFM:REP 39->121|PF03423|7.5e-12|27.7|83/87|CBM_25| OP:NHOMO 15 OP:NHOMOORG 8 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------3-----1---413-1--1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 88 STR:RPRED 68.2 SQ:SECSTR ###################################ccccccEEEEEEcc##cccccccEEEEEEcTTcccccTTcEEcEEccEccEEEEEcccTTcEEEEEEEcccccEEcGGGTcEEEEcEEEE#### DISOP:02AL 1-6,124-130| PSIPRED ccccccccccccHHHHHHHHHHHHccccEEEEEcccccccEEEEEEcHHHHccccccEEEEEEcccccccccccccEEEEcccEEEEEEEcccccccEEEEEcccccccccccccEEEEEccccccccc //