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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50850.1
DDBJ      :             aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  721/915 : Eukaryota  181/199 : Viruses  0/175   --->[See Alignment]
a.182.1d.128.1
:479 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->418 2g5iB PDBj e-139 57.2 %
:RPS:PDB   4->406 2df4B PDBj 0.0 58.8 %
:RPS:SCOP  4->300 2df4B2  d.128.1.5 * e-147 61.6 %
:RPS:SCOP  301->406 2df4B1  a.182.1.2 * 3e-33 50.9 %
:RPS:SCOP  408->479 1ng6A  a.182.1.1 * 2e-05 30.8 %
:HMM:SCOP  6->300 2f2aB2 d.128.1.5 * 2e-130 60.3 %
:HMM:SCOP  301->407 2f2aB1 a.182.1.2 * 3.8e-40 55.1 %
:RPS:PFM   8->293 PF02934 * GatB_N e-116 66.1 %
:RPS:PFM   333->479 PF02637 * GatB_Yqey 2e-50 63.9 %
:HMM:PFM   6->293 PF02934 * GatB_N 2e-131 58.7 286/289  
:HMM:PFM   332->479 PF02637 * GatB_Yqey 4.5e-63 56.8 148/149  
:BLT:SWISS 4->479 GATB_PELTS 0.0 72.3 %
:PROS 148->162|PS01234|GATB

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50850.1 GT:GENE ABO50850.1 GT:PRODUCT aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2558367..2559806) GB:FROM 2558367 GB:TO 2559806 GB:DIRECTION - GB:PRODUCT aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B GB:NOTE TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit PFAM: GatB/Yqey domain protein; GatB N-terminal region; GatB, central domain protein KEGG: chy:CHY_1103 aspartyl/glutamyl-tRNA amidotransferase subunit B GB:PROTEIN_ID ABO50850.1 GB:DB_XREF GI:134052879 InterPro:IPR003789 InterPro:IPR004413 InterPro:IPR006075 InterPro:IPR006107 LENGTH 479 SQ:AASEQ MTQQYETVIGIEVHVELKTNTKIFCNSTTEFGGDPNHHTCPVCLGLPGTLPVLNKKVVEYAVRASLALNCQVANFSKFDRKNYYYPDLPKNYQISQYDLPIAEHGYLDIVADGQPKRIGITRLHMEEDAGKLVHQGNIVTTPYSLVDYNRTGVPLIEIVSEPDMRSSEEARAYVEKLKAIVQYTGVSDCRMEEGSLRCDVNVSVRPVGQKEFGTKAEIKNLNSFRALQRALDFEVERQIGVLESGGRIIQETRTWDEARGITVSMRSKEEAHDYRYFPDPDLVPLVLDNQWIDFIRESLPELPDQRRSRYITEYGLPEYDAALLTLTKEMSDYFEEVMEHYNNPKAISNWIMGELSRLLNAGGIEITACKIKPAQLAEMLKLLDKGTISGKIAKAVFEEMFASGKDPEAIVKEKGLVQISDEGAIASIVDEVIAANPKSVQDYQAGKTQAIGFLVGQVMKATKGKANPEMVNKMLREKL GT:EXON 1|1-479:0| BL:SWS:NREP 1 BL:SWS:REP 4->479|GATB_PELTS|0.0|72.3|476/478| PROS 148->162|PS01234|GATB|PDOC00948| BL:PDB:NREP 1 BL:PDB:REP 5->418|2g5iB|e-139|57.2|409/410| RP:PDB:NREP 1 RP:PDB:REP 4->406|2df4B|0.0|58.8|398/399| RP:PFM:NREP 2 RP:PFM:REP 8->293|PF02934|e-116|66.1|283/288|GatB_N| RP:PFM:REP 333->479|PF02637|2e-50|63.9|147/148|GatB_Yqey| HM:PFM:NREP 2 HM:PFM:REP 6->293|PF02934|2e-131|58.7|286/289|GatB_N| HM:PFM:REP 332->479|PF02637|4.5e-63|56.8|148/149|GatB_Yqey| GO:PFM:NREP 4 GO:PFM GO:0006412|"GO:translation"|PF02934|IPR006075| GO:PFM GO:0016874|"GO:ligase activity"|PF02934|IPR006075| GO:PFM GO:0006412|"GO:translation"|PF02637|IPR018027| GO:PFM GO:0016884|"GO:carbon-nitrogen ligase activity, with glutamine as amido-N-donor"|PF02637|IPR018027| RP:SCP:NREP 3 RP:SCP:REP 4->300|2df4B2|e-147|61.6|292/292|d.128.1.5| RP:SCP:REP 301->406|2df4B1|3e-33|50.9|106/107|a.182.1.2| RP:SCP:REP 408->479|1ng6A|2e-05|30.8|65/148|a.182.1.1| HM:SCP:REP 6->300|2f2aB2|2e-130|60.3|287/0|d.128.1.5|1/1|Glutamine synthetase/guanido kinase| HM:SCP:REP 301->407|2f2aB1|3.8e-40|55.1|107/0|a.182.1.2|1/1|GatB/YqeY motif| OP:NHOMO 1063 OP:NHOMOORG 958 OP:PATTERN 22121212222222211------2211112222222222222211111222212111----1-1-212 1111111111111111111-1111111111111111111111111111111111111111111111111111111111-111111111--------1--------1112111111111111111111111111111111111111111111111111111111111111111111111111112211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-2111111111111-111---11211111122211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122111111111111111111111111211----11-------------------------111111---------------------------------------------------------------------------------------------11111111111111---------------111111111111111111111111111111111111111----------------------------11111111111111111111-----1-11111111111111111111111111111111 11--111-1-----1111111111111111111111111111111111111111111-1111111111111111121-1111111112-1211111111-111111-1-1121112211111113-111191-1111111211211111111111111115111111111A11-11-12E2221111131421111112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 470 STR:RPRED 98.1 SQ:SECSTR ##cccEEEEEEEEEEEccccccccccccccccccTTccccTTTTTcTTccccccHHHHHHHHHHHHTTTcEEccEEccEEEEcccTTcTTcEEEEccccccEEEEEEEEEccccEEEEEEEEEEEEEcccEEEccTTTETTTccEEETTcTTcEEEEEEEcTTcccHHHHHHHHHHHHHHHHHHTcccccTTTTcEEEEEEEEEEcTTccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcTTTccEEEEEEcccccccccEEcTTcccEEccHHHHHHHHHTccccHHHHHTTTTcTTccccHHHHHHcccHHHHHHHHHHHHHTccHHHHHHHHHTTHHHHHHHHTcccTTTcccHHHHHHHHHHHHTTcccGGGHHHHHHHHHHcccccTTHHHHTccccEcHHHHHHHHHTTcTTTcccHHHHHTTTTHHHHHHHHTTcc###cccGGGHHHHHHH#### DISOP:02AL 1-2| PSIPRED ccccccEEEEEEEEEEEcccccccccccccccccccccccEEEcccccccccccHHHHHHHHHHHHHHccEEccEEEEEEEEEEcccccccHHHHHHccccccccEEEEEEcccEEEEEEEEEEccccccccccccccccccEEEEEEccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEEccccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccccEEEccccccccccccccccccccEEEcHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHccEEcccHHHHHHHHHHHHHccHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHc //