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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50935.1
DDBJ      :             transcriptional regulator, AbrB family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.129.1
:81 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   5->43 1ektA PDBj 2e-04 30.8 %
:RPS:SCOP  2->44 1mvfD  b.129.1.1 * 2e-05 27.9 %
:HMM:SCOP  1->73 1ub4C_ b.129.1.1 * 2.3e-08 26.0 %
:HMM:PFM   9->45 PF04014 * SpoVT_AbrB 9.7e-07 27.0 37/47  
:HMM:PFM   41->80 PF08165 * FerA 0.00034 27.5 40/66  
:BLT:SWISS 10->73 Y2626_MYCBO 9e-06 31.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50935.1 GT:GENE ABO50935.1 GT:PRODUCT transcriptional regulator, AbrB family GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 2642141..2642386 GB:FROM 2642141 GB:TO 2642386 GB:DIRECTION + GB:PRODUCT transcriptional regulator, AbrB family GB:NOTE TIGRFAM: transcriptional regulator, AbrB family KEGG: swo:Swol_2475 transcriptional regulator, AbrB family GB:PROTEIN_ID ABO50935.1 GB:DB_XREF GI:134052964 InterPro:IPR006339 LENGTH 81 SQ:AASEQ MSINKMSYKGQVVIPKQLREKYGLKPEQNIKITEIDGHIAIIPLLDDPIKDTRGILKKTHPMIVSSADELIKEYREEEKSL GT:EXON 1|1-81:0| BL:SWS:NREP 1 BL:SWS:REP 10->73|Y2626_MYCBO|9e-06|31.2|64/81| RP:PDB:NREP 1 RP:PDB:REP 5->43|1ektA|2e-04|30.8|39/53| HM:PFM:NREP 2 HM:PFM:REP 9->45|PF04014|9.7e-07|27.0|37/47|SpoVT_AbrB| HM:PFM:REP 41->80|PF08165|0.00034|27.5|40/66|FerA| RP:SCP:NREP 1 RP:SCP:REP 2->44|1mvfD|2e-05|27.9|43/44|b.129.1.1| HM:SCP:REP 1->73|1ub4C_|2.3e-08|26.0|73/0|b.129.1.1|1/1|AbrB/MazE/MraZ-like| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1---1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 39 STR:RPRED 48.1 SQ:SECSTR ####cccTTccccccHHHHHHHcccccccEEEEEETTEEEEEE###################################### DISOP:02AL 1-6,72-74,76-82| PSIPRED ccEEEEEccccEEEHHHHHHHHccccccEEEEEEEccEEEEEEcccccHHHHHHHHcccccEEEEEHHHHHHHHHHHHHcc //