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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50940.1
DDBJ      :             carbon storage regulator, CsrA
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.151.1
:59 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->58 1t3oA PDBj 1e-04 41.4 %
:RPS:PDB   1->47 2btiB PDBj 2e-06 26.1 %
:RPS:SCOP  2->47 1vpzA  b.151.1.1 * 4e-07 28.3 %
:HMM:SCOP  1->55 1vpzA_ b.151.1.1 * 6e-13 47.3 %
:RPS:PFM   1->49 PF02599 * CsrA 4e-05 38.8 %
:HMM:PFM   1->49 PF02599 * CsrA 4.5e-23 51.0 49/54  
:BLT:SWISS 1->58 CSRA_CLOTH 2e-06 67.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50940.1 GT:GENE ABO50940.1 GT:PRODUCT carbon storage regulator, CsrA GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2646556..2646735) GB:FROM 2646556 GB:TO 2646735 GB:DIRECTION - GB:PRODUCT carbon storage regulator, CsrA GB:NOTE PFAM: carbon storage regulator KEGG: rba:RB8149 probable carbon storage regulator GB:PROTEIN_ID ABO50940.1 GB:DB_XREF GI:134052969 InterPro:IPR003751 LENGTH 59 SQ:AASEQ MLVLTRKENQSVVINKEVKVVVLEVIGNTVKLGIQAPNSMDIVRTELLELAGENCPAAN GT:EXON 1|1-59:0| BL:SWS:NREP 1 BL:SWS:REP 1->58|CSRA_CLOTH|2e-06|67.2|58/75| SEG 12->26|vvinkevkvvvlevi| BL:PDB:NREP 1 BL:PDB:REP 1->58|1t3oA|1e-04|41.4|58/84| RP:PDB:NREP 1 RP:PDB:REP 1->47|2btiB|2e-06|26.1|46/55| RP:PFM:NREP 1 RP:PFM:REP 1->49|PF02599|4e-05|38.8|49/54|CsrA| HM:PFM:NREP 1 HM:PFM:REP 1->49|PF02599|4.5e-23|51.0|49/54|CsrA| GO:PFM:NREP 3 GO:PFM GO:0003723|"GO:RNA binding"|PF02599|IPR003751| GO:PFM GO:0006109|"GO:regulation of carbohydrate metabolic process"|PF02599|IPR003751| GO:PFM GO:0006402|"GO:mRNA catabolic process"|PF02599|IPR003751| RP:SCP:NREP 1 RP:SCP:REP 2->47|1vpzA|4e-07|28.3|46/57|b.151.1.1| HM:SCP:REP 1->55|1vpzA_|6e-13|47.3|55/0|b.151.1.1|1/1|CsrA-like| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 58 STR:RPRED 98.3 SQ:SECSTR cccccccTTcEEETTTEEEEEEEEEcTTEEEEEEEccTTcccccHHHcccTTTcTTcc# DISOP:02AL 52-52,55-60| PSIPRED cEEEEEccccEEEEccEEEEEEEEEEccEEEEEEEcccccEEcHHHHHHHHHHHHHccc //