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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50969.1
DDBJ      :             protein of unknown function DUF34
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  363/915 : Eukaryota  105/199 : Viruses  1/175   --->[See Alignment]
c.135.1d.58.5
:371 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->371 2gx8C PDBj 8e-73 42.3 %
:RPS:PDB   162->235 2e66A PDBj 8e-06 14.1 %
:RPS:SCOP  4->135 2fywA1  c.135.1.1 * 8e-36 26.5 %
:RPS:SCOP  152->235 1gnkA  d.58.5.1 * 1e-06 11.1 %
:RPS:SCOP  232->371 2fywA1  c.135.1.1 * 3e-33 36.1 %
:HMM:SCOP  1->371 2gx8A1 c.135.1.1 * 2.8e-138 54.3 %
:RPS:PFM   7->132 PF01784 * NIF3 3e-31 50.0 %
:RPS:PFM   237->351 PF01784 * NIF3 6e-26 48.7 %
:HMM:PFM   6->348 PF01784 * NIF3 1.1e-86 49.6 238/242  
:BLT:SWISS 1->330 Y1380_BACHD 5e-73 41.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50969.1 GT:GENE ABO50969.1 GT:PRODUCT protein of unknown function DUF34 GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2675265..2676380) GB:FROM 2675265 GB:TO 2676380 GB:DIRECTION - GB:PRODUCT protein of unknown function DUF34 GB:NOTE PFAM: protein of unknown function DUF34 KEGG: mta:Moth_0626 protein of unknown function DUF34 GB:PROTEIN_ID ABO50969.1 GB:DB_XREF GI:134052998 InterPro:IPR002678 LENGTH 371 SQ:AASEQ MSTAREIVSMLEQIAPRHLAEEWDNSGWQVGDPAAGVSKVLLTLDVDAVVVREAVEKQVNLIISHHPLLMKGIKNIRLDEPKGELIAQLIKNNIGLYAAHTNLDSAAGGVNEQLAKRLGLQNIEVLHPAKGEKHLKLVVFVPVQQVEGVQRAISQAGAGWIGNYSDCTFSVQGEGTFRPLEGTNPFIGQQGQLEQVAESRLETIVPASKIKTVLKAMLEAHPYEEVAYDLYPLENQTSNAGLGRIGHLAETQSFADFIIAVKEALGLASVKVGGSMWKDVRRIAVCGGSGAELWPIAFAKGADVYITGDIKYHTAQDMLASGLNFIDAGHFATEHVILPELQRILSEACVKKNLVVEFMLTKRQSNPFMFL GT:EXON 1|1-371:0| BL:SWS:NREP 1 BL:SWS:REP 1->330|Y1380_BACHD|5e-73|41.2|330/372| SEG 40->56|vlltldvdavvvreave| SEG 138->150|vvfvpvqqvegvq| BL:PDB:NREP 1 BL:PDB:REP 6->371|2gx8C|8e-73|42.3|357/364| RP:PDB:NREP 1 RP:PDB:REP 162->235|2e66A|8e-06|14.1|64/102| RP:PFM:NREP 2 RP:PFM:REP 7->132|PF01784|3e-31|50.0|126/240|NIF3| RP:PFM:REP 237->351|PF01784|6e-26|48.7|115/240|NIF3| HM:PFM:NREP 1 HM:PFM:REP 6->348|PF01784|1.1e-86|49.6|238/242|NIF3| RP:SCP:NREP 3 RP:SCP:REP 4->135|2fywA1|8e-36|26.5|132/265|c.135.1.1| RP:SCP:REP 152->235|1gnkA|1e-06|11.1|63/98|d.58.5.1| RP:SCP:REP 232->371|2fywA1|3e-33|36.1|138/265|c.135.1.1| HM:SCP:REP 1->371|2gx8A1|2.8e-138|54.3|370/0|c.135.1.1|1/1|NIF3 (NGG1p interacting factor 3)-like| OP:NHOMO 529 OP:NHOMOORG 477 OP:PATTERN -----------------------------------11---111--1-----1-1-------------- ----111111111111111-1111111-111111111111111111111--121111111111111111111111111----1-----111111111--11111111111------------------------------------1--------------------111---------------------111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111-111111111111111121111111111111111111-11111--1111111111111111-11--1------------11------------------------------------------------------------------------------------------------------------------------------11------------------------------------------------------1211-11111111-111111111-----1-11111111111---1111---1111-------11----1-----------------------------------------------------------------------------------------------------------------------111111211-1111---------------1111111111112222211122121-111---------2-------------------------------1------------------------------------------------------- ----11--2111--11----111221-11-1-1111-1111111111-1111211-112112-11---------1-------111----1-1--1------1---1----21-211-11-11113214-C81-312-1-121111111--1-11112111--1111111----21--------------1--------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 362 STR:RPRED 97.6 SQ:SECSTR ###HHHHHHHHTTTccGGGccTTcccEEEEccccccccEEEEEccccHHHHHHHHHHTccEEEEcccccccccccccTTcHHHHHHHHHHHTTcEEEEccHHHHHcTTcHHHHHHHHHTcEEEEEEEEEEEEEEEEEEEEEcHHHHHHHHHHHHHTTccccTTcccEEEEEEEEEEEETccc######ETTEEEEEEEEEEEEEEcGGGHHHHHHHHHHHccccccccEEEEcccEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHTccccEEEccTTcEEEEEEEEEEEcGGGHHHHHHTTccEEEEEcccHHHHHHHHHHTcEEEEccGGGGGGHHHHHHHHHHHHHHHHTTcccEEEEccccccccccc DISOP:02AL 1-1| PSIPRED cccHHHHHHHHHHHccHHHcccccccEEEEccccccEEEEEEEEcccHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHHHHHcccEEEEEccccccccccHHHHHHHHHccccEEEEEcccccccccEEEcccccHHHHHHHHHHHccccEEccEEEEEEEEEEcccccccccccccccccEEEEEEEEcccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccHHHHHHHHHHHHcccEEEEEccccccEEEEEEEEccHHHHHHHHHHccccEEEEccccHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHHHHHccccccEEEEEEEccccccEEc //