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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50988.1
DDBJ      :             S-layer domain protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  7/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:387 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   103->135 PF00395 * SLH 2e-05 45.5 %
:HMM:PFM   96->136 PF00395 * SLH 9.1e-12 50.0 40/45  
:HMM:PFM   229->272 PF00395 * SLH 4.5e-11 34.9 43/45  
:BLT:SWISS 84->145 SLAP1_CLOTH 4e-08 38.7 %
:BLT:SWISS 205->277 GUN_BACS6 3e-04 33.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50988.1 GT:GENE ABO50988.1 GT:PRODUCT S-layer domain protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2699665..2700828) GB:FROM 2699665 GB:TO 2700828 GB:DIRECTION - GB:PRODUCT S-layer domain protein GB:NOTE PFAM: S-layer domain protein domain protein KEGG: swo:Swol_2183 hypothetical protein GB:PROTEIN_ID ABO50988.1 GB:DB_XREF GI:134053017 InterPro:IPR001119 LENGTH 387 SQ:AASEQ MSKVGKGIITLAVASSLLVGGAMADAAPGGNGKGSSDKSSKPSSSQVQKSSSQSNSGTQNKSVNGVEIKETKTNKANNDKKFGEVQSKVKYAAKDFKDTQNHWAKGPIQRLQMLGIASGFPDGTFQPEAPVTQEQVVSMVVRTLELQGEEINETTNETDEITTEQTEATEEELEDVPNWARGAVAEAKAKGIINLNRFHSGVQASRVQSMVWLAKAMDLEPVETTGLPFKDGILVSPEDMGYVMALYKEGLVAGGPGGMLNPNSAVTRAQIAALIDRMLTEEQTEDTDTFQGVETADGQQVLKIGTGENAEEIKLADEVEIYINGELAELSDLVKGTAVKVETNEEGLAIKIEQTVEESTTEDDTTVEEETDNTAENSTEDTDNINS GT:EXON 1|1-387:0| BL:SWS:NREP 2 BL:SWS:REP 84->145|SLAP1_CLOTH|4e-08|38.7|62/2313| BL:SWS:REP 205->277|GUN_BACS6|3e-04|33.3|67/941| SEG 29->62|ggngkgssdksskpsssqvqksssqsnsgtqnks| SEG 149->175|eeinettnetdeitteqteateeeled| SEG 280->289|teeqtedtdt| SEG 355->377|tveestteddttveeetdntaen| RP:PFM:NREP 1 RP:PFM:REP 103->135|PF00395|2e-05|45.5|33/45|SLH| HM:PFM:NREP 2 HM:PFM:REP 96->136|PF00395|9.1e-12|50.0|40/45|SLH| HM:PFM:REP 229->272|PF00395|4.5e-11|34.9|43/45|SLH| OP:NHOMO 12 OP:NHOMOORG 7 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------5----------------------------------------------------------------------------------------------------------------------1---1--1121------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2,29-60,386-388| PSIPRED cccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHccccccccccccccccccEEEEccccccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEcccccccHHHHHHHHHHHccccccccccccEEEcccccHHHHHHHHHHHHcccEEEcccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccEEEEccccccccEEEEEEEEEEEccccHHHHHHcccccEEEEEccccHHHHHHHHHHcccHHHHHHHHHHHcccEEEEHHHHHccccc //