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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO51016.1
DDBJ      :             DNA polymerase III, delta subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  145/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.80.1c.37.1
:346 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   59->182 1eaqB PDBj 2e-05 16.4 %
:RPS:SCOP  3->147 1jqlB  c.37.1.20 * 2e-16 16.5 %
:RPS:SCOP  224->340 1jqjC1  a.80.1.1 * 2e-09 14.9 %
:HMM:SCOP  1->216 1jr3D2 c.37.1.20 * 1.5e-19 21.7 %
:HMM:SCOP  223->342 1jr3D1 a.80.1.1 * 1.4e-18 31.9 %
:RPS:PFM   21->181 PF06144 * DNA_pol3_delta 1e-20 39.0 %
:HMM:PFM   20->198 PF06144 * DNA_pol3_delta 3.9e-30 30.2 169/172  
:BLT:SWISS 10->327 YQEN_BACSU 7e-34 29.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO51016.1 GT:GENE ABO51016.1 GT:PRODUCT DNA polymerase III, delta subunit GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2726553..2727593) GB:FROM 2726553 GB:TO 2727593 GB:DIRECTION - GB:PRODUCT DNA polymerase III, delta subunit GB:NOTE TIGRFAM: DNA polymerase III, delta subunit PFAM: DNA polymerase III, delta KEGG: mta:Moth_0576 DNA polymerase III, delta subunit GB:PROTEIN_ID ABO51016.1 GB:DB_XREF GI:134053045 InterPro:IPR005790 InterPro:IPR010372 LENGTH 346 SQ:AASEQ MEYYKGLINSLQRGVVSPVYLFYGEEEYLKEKAVEKFKEFLLPQAADFNLDLLDGEEADIDTVISFAENMPFMAERRLVIVKNAPWFSGKGKNEAGGEDKGSGKDTVLLKYLNNPASTTCLVFVAKEAVDRRKKTYKEISAKGQVIDFKMLKPSEMITWVNQIVKGTGKTIEPSAARAIVEANGKLGLLNLKNEVNKLISYLGSEQEITSAIVGEVGVINIEQNIFTVVDDAVAGHTSKALNGIRELLSLKEQPTKILALLARQLRIALQAEALLREGSPEREVARKMGIHDFVIKKALTQIRRGGSQRMKWALQEIATIDAAIKKGQRDFLPAIETMLIQFGQME GT:EXON 1|1-346:0| BL:SWS:NREP 1 BL:SWS:REP 10->327|YQEN_BACSU|7e-34|29.8|312/347| SEG 183->198|ngklgllnlknevnkl| SEG 257->277|ilallarqlrialqaeallre| RP:PDB:NREP 1 RP:PDB:REP 59->182|1eaqB|2e-05|16.4|110/122| RP:PFM:NREP 1 RP:PFM:REP 21->181|PF06144|1e-20|39.0|146/168|DNA_pol3_delta| HM:PFM:NREP 1 HM:PFM:REP 20->198|PF06144|3.9e-30|30.2|169/172|DNA_pol3_delta| GO:PFM:NREP 4 GO:PFM GO:0003677|"GO:DNA binding"|PF06144|IPR010372| GO:PFM GO:0003887|"GO:DNA-directed DNA polymerase activity"|PF06144|IPR010372| GO:PFM GO:0006260|"GO:DNA replication"|PF06144|IPR010372| GO:PFM GO:0009360|"GO:DNA polymerase III complex"|PF06144|IPR010372| RP:SCP:NREP 2 RP:SCP:REP 3->147|1jqlB|2e-16|16.5|133/140|c.37.1.20| RP:SCP:REP 224->340|1jqjC1|2e-09|14.9|114/117|a.80.1.1| HM:SCP:REP 1->216|1jr3D2|1.5e-19|21.7|198/211|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 223->342|1jr3D1|1.4e-18|31.9|119/127|a.80.1.1|1/1|DNA polymerase III clamp loader subunits, C-terminal domain| OP:NHOMO 147 OP:NHOMOORG 145 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------11111--1---111111111-1---------------11--111111111111---1---------------------------------------------1-1111111111111112111111111111111111111111111111111111111111111111----1---11111111111------------------------------------------------111------------11------1-1--1111111111111111111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------111111111-------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 110 STR:RPRED 31.8 SQ:SECSTR ##########################################################HHHHcTTTcEEcc##cTTEEEcccccEEETTcccccc############cEEEEcccccTTcEEEEEEccccccccEEccEEEETTEEEccccEEccccTTccccEEEEEEcccccEEEEcccc#################################################################################################################################################################### DISOP:02AL 1-1,346-347| PSIPRED cccHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHcccccccccEEEEEEcHHHcccccccccccccccccHHHHHHHHHccccccEEEEEEcccccccHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccHHHHHHHHcccccccHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccc //