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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO51034.1
DDBJ      :             ABC transporter related
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:505 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   1->220 1g6hA PDBj 3e-27 30.5 %
:BLT:PDB   266->485 3dhwC PDBj 2e-17 28.1 %
:RPS:PDB   6->488 3cmvG PDBj 1e-51 11.2 %
:RPS:SCOP  3->244 1b0uA  c.37.1.12 * 5e-38 23.4 %
:RPS:SCOP  258->488 1b0uA  c.37.1.12 * 1e-28 21.0 %
:HMM:SCOP  6->220 1ii8.1 c.37.1.12 * 5.1e-60 32.4 %
:HMM:SCOP  254->502 1g6hA_ c.37.1.12 * 3.4e-41 27.8 %
:RPS:PFM   43->170 PF00005 * ABC_tran 2e-10 34.1 %
:RPS:PFM   399->426 PF00005 * ABC_tran 1e-04 53.6 %
:HMM:PFM   43->170 PF00005 * ABC_tran 4.6e-24 35.9 117/118  
:HMM:PFM   315->426 PF00005 * ABC_tran 8.9e-11 35.2 71/118  
:HMM:PFM   272->299 PF02367 * UPF0079 0.00025 42.9 28/123  
:HMM:PFM   148->195 PF01695 * IstB 0.00099 31.9 47/178  
:HMM:PFM   17->57 PF00488 * MutS_V 0.0008 29.3 41/234  
:BLT:SWISS 3->497 RBSA_GEOKA e-140 51.2 %
:PROS 142->156|PS00211|ABC_TRANSPORTER_1
:PROS 399->413|PS00211|ABC_TRANSPORTER_1
:REPEAT 2|17->217|266->474

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO51034.1 GT:GENE ABO51034.1 GT:PRODUCT ABC transporter related GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2743538..2745055) GB:FROM 2743538 GB:TO 2745055 GB:DIRECTION - GB:PRODUCT ABC transporter related GB:NOTE PFAM: ABC transporter related SMART: AAA ATPase KEGG: gka:GK3228 ribose ABC transporter (ATP-binding protein) GB:PROTEIN_ID ABO51034.1 GB:DB_XREF GI:134053063 InterPro:IPR003439 InterPro:IPR003593 LENGTH 505 SQ:AASEQ MQLLEMKDITKDFPGAKVLNGVHLTVNKKEIHALLGENGAGKSTLMKILTGIYTMNSGAIFYEGKQTQIKGSKQAEELGIVMIHQEFNLVPHLSIAENIFLGGEGPYARMGIINWSVLIEAARKFTEQVGLKVHPKTPVAQLSVGEKQLVEIAKALSRKAKLLIMDEPTAALTEKEKAKLFKIMENLVEQGVSIVYISHRMEELFQICHRVTVMRDGNYIDTLKITETSIDELVALMVGREVSERFPKTISKPGQVILKVHNFKNKALDDVSIELKAGEVVGIGGLMGAGRTELARAIFGLDPVQGSVSIMGQEGVIFQGCFKHPAEAIKHGLALVTEDRKDEGLILPFSVQGNLALPTLHARSRLGIIDRVKESEMTRKYISILKIKVSGPGQPVKSLSGGNQQKVVFGKWLETKPKILILDEPTRGVDVGAKVEIYELMNRLTTQGLGILLISSDLQELMGMSDRVYVMYEGRVTGHFTRDEITEEAFMYCATGGVQWEAQGT GT:EXON 1|1-505:0| BL:SWS:NREP 1 BL:SWS:REP 3->497|RBSA_GEOKA|e-140|51.2|490/494| PROS 142->156|PS00211|ABC_TRANSPORTER_1|PDOC00185| PROS 399->413|PS00211|ABC_TRANSPORTER_1|PDOC00185| NREPEAT 1 REPEAT 2|17->217|266->474| BL:PDB:NREP 2 BL:PDB:REP 1->220|1g6hA|3e-27|30.5|220/254| BL:PDB:REP 266->485|3dhwC|2e-17|28.1|199/343| RP:PDB:NREP 1 RP:PDB:REP 6->488|3cmvG|1e-51|11.2|456/1167| RP:PFM:NREP 2 RP:PFM:REP 43->170|PF00005|2e-10|34.1|123/123|ABC_tran| RP:PFM:REP 399->426|PF00005|1e-04|53.6|28/123|ABC_tran| HM:PFM:NREP 5 HM:PFM:REP 43->170|PF00005|4.6e-24|35.9|117/118|ABC_tran| HM:PFM:REP 315->426|PF00005|8.9e-11|35.2|71/118|ABC_tran| HM:PFM:REP 272->299|PF02367|0.00025|42.9|28/123|UPF0079| HM:PFM:REP 148->195|PF01695|0.00099|31.9|47/178|IstB| HM:PFM:REP 17->57|PF00488|0.0008|29.3|41/234|MutS_V| GO:PFM:NREP 4 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 3->244|1b0uA|5e-38|23.4|239/258|c.37.1.12| RP:SCP:REP 258->488|1b0uA|1e-28|21.0|225/258|c.37.1.12| HM:SCP:REP 6->220|1ii8.1|5.1e-60|32.4|213/370|c.37.1.12|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 254->502|1g6hA_|3.4e-41|27.8|241/254|c.37.1.12|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 43343 OP:NHOMOORG 1172 OP:PATTERN RRHANKGFVVUSVPVIgHSQKRNZsFKUiNYQHBCDD7FEFBBQYPWeOR*xh9LYPQRMQJKDW198 NSiI*UVbkjkRQNTMMII-IY77O*IIIIJElfgfm***P*O*f*nZkbTK*vvNMYBBry*d*jt***XVTTTvYVWLqYmA9A8BONPL4KEHG--GGQJKKbJYDP66666667998888FUQJPWKJQSXOemlrwKJJuaoafqYYgXcRRHDHEHFZZYew*zUMMFIFGGOHLDFiUZOLif8Seq********y**********uu***cow**cipppmnn**ThikjkggiihhhihTZTTVxbVYtrVPTSdsrPQ**WTQXfcfhkllprmgpyrqnpnnhhnpkllabbaZaabdaaaayggaZaijkgi*v*********g*jm***Zjkf*kjts*hkSI**ljXbgiQWgZlgPYYSMWMQQIGKHGJaU***YOr****************-gm*eW*i***MB**************GIJ**********POPPPPPPwWZGPcT*66566555323456884555466676464IBACAB***********zwxzt********i********9Kvwr*dpin******WhiHWIMfPHHGFGGFQNLViiZ**OfSsjSgrXUkKYVWNRZeTVVYSVivY*HJIPEIIIJEE9AA9A9BA9GRGGKKJnitJpTXHSLtQSVWULUcRQQRRRZYUXW5-BIRJK311222*w**R*ptzzwuxuyss-xtrtutwstuyyupqsqpp*****ffbjjhhijjjjjghjhhh*lhhmmmpR5************33DGEFDEFLNOLHK*f*WWUWVXGKPJJROTbJLNLLESHLSmbppmps***k**tve***DECBBFDBEHhpmwoppppy*wxvMMIGJHHGHGBAAA66KQMMIHIJ98797898*ATCBB99-8BBADABJKF8AABC9668VloSVj*jjfBbL -111QQ7-OC3ADLC87864BB7E5B8995857EEE5C8998A655649FC9FB7787766873452431133433213243323332-CF573546424536E8428KFTKJLYQREED6CJJed6pC**e4dOcGED8V9BWL9G9CASB9*CQHJiCU*CYFO7gPR*VUJB67A3*5657BSMRw7gWBAXKRN9 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 496-506| PSIPRED ccEEEEEcEEEEEccEEEEcccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccEEcccccHHHHHHcccEEEcccccccccccHHHHHHHcccccccccccccHHHHHHHHHHHHHHccccccccccHHHccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEEccEEEEEEcHHHccHHHHHHHHHHHHcccccccccccccccEEEEEcccccEEccccEEEccccEEEEEccccccHHHHHHHHHcccccccEEEEccEEccccccccccHHHHHHcccEEcccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccccHHccccHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEEccEEEEEEcHHHHcHHHHHHHHHcccccccccc //