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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO51086.1
DDBJ      :             cell wall hydrolase/autolysin
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  239/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.56.5
:240 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   55->238 1jwqA PDBj 3e-13 33.3 %
:RPS:PDB   52->230 3czxA PDBj 2e-26 16.1 %
:RPS:SCOP  55->237 1jwqA  c.56.5.6 * 7e-38 33.9 %
:HMM:SCOP  53->242 1xovA2 c.56.5.6 * 4.9e-46 41.2 %
:RPS:PFM   56->233 PF01520 * Amidase_3 1e-26 41.8 %
:HMM:PFM   57->235 PF01520 * Amidase_3 1.5e-49 41.0 166/175  
:BLT:SWISS 51->238 YQII_BACSU 1e-20 32.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO51086.1 GT:GENE ABO51086.1 GT:PRODUCT cell wall hydrolase/autolysin GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2805265..2805987) GB:FROM 2805265 GB:TO 2805987 GB:DIRECTION - GB:PRODUCT cell wall hydrolase/autolysin GB:NOTE PFAM: cell wall hydrolase/autolysin KEGG: dsy:DSY0132 hypothetical protein GB:PROTEIN_ID ABO51086.1 GB:DB_XREF GI:134053115 InterPro:IPR002508 LENGTH 240 SQ:AASEQ MYIKGPYRKKRNPWFLPILVVVILLPAGVFLKGCLYRSEAKPPPKPQKKPISNHVLIIDPGHGGTDPGACREGIMEKDINLAIAKRVAKHIEGHRVRLTREKDVDFVQKGVYTRDAERQDLESRIDLAQKYHGEVFVSIHINTGEGQDSGVLVYYDPKDPASTRLAQAIQLEANNLPDSPDKKPRPDDFYLFNNLKIPVVIVEAGWLCNPTERKRLMDPVYQEQVANAIARGITNFLDTL GT:EXON 1|1-240:0| BL:SWS:NREP 1 BL:SWS:REP 51->238|YQII_BACSU|1e-20|32.2|177/206| TM:NTM 1 TM:REGION 15->37| SEG 16->26|lpilvvvillp| SEG 41->50|kpppkpqkkp| SEG 177->188|pdspdkkprpdd| BL:PDB:NREP 1 BL:PDB:REP 55->238|1jwqA|3e-13|33.3|168/179| RP:PDB:NREP 1 RP:PDB:REP 52->230|3czxA|2e-26|16.1|161/178| RP:PFM:NREP 1 RP:PFM:REP 56->233|PF01520|1e-26|41.8|165/175|Amidase_3| HM:PFM:NREP 1 HM:PFM:REP 57->235|PF01520|1.5e-49|41.0|166/175|Amidase_3| GO:PFM:NREP 2 GO:PFM GO:0008745|"GO:N-acetylmuramoyl-L-alanine amidase activity"|PF01520|IPR002508| GO:PFM GO:0009253|"GO:peptidoglycan catabolic process"|PF01520|IPR002508| RP:SCP:NREP 1 RP:SCP:REP 55->237|1jwqA|7e-38|33.9|168/179|c.56.5.6| HM:SCP:REP 53->242|1xovA2|4.9e-46|41.2|177/0|c.56.5.6|1/1|Zn-dependent exopeptidases| OP:NHOMO 443 OP:NHOMOORG 241 OP:PATTERN ----------------------------------------------------1----1---------- ----------------------------------------1-------------------11---1--------------1----111---11111-------1--1-1-111111111111111---------------------222122111221111--2211322--1111111-1-1112--1--1354444443424443435755453454352412111112441111-1111111111---1---1-11-1---11--111111-2--------------------------------------11---111137512222223242333332111354--2124355365225332223-11----11------1------------111-1111111---1--1------1----------------11-1111-11--------------1-------------------------------------------------------------------------------------1-1------------------------1-----11---------1-11-11-1-----1------------------11----------------------------------1-----1-------------------------------------------------------------------------------------------11-11----------------------------------1--------1-------------------------------------------------1------------------------------------------------------11 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 187 STR:RPRED 77.9 SQ:SECSTR ###################################################TTccEEEEEcccccccccEETTEEHHHHHHHHHHHHHHHHHHHccEEEccccccGcccTTccHHHHHccHHHHHHHHHHHTccEEEEEccccccTTccccEEEEcGGHHHGHHHHHHHHHcccccTcTTEEEGGGcccTTHHHHHTTcEEEEcccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHT## DISOP:02AL 1-7,37-52| PSIPRED ccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHccEEEEEEccccccccccccccccccccHHHHHHHHHHccccEEEEEEEccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccccEEEEEHHccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc //