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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO51091.1
DDBJ      :             transcriptional regulator, XRE family
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  7/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:71 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->67 1utxA PDBj 1e-08 43.4 %
:RPS:PDB   5->68 3clcA PDBj 3e-11 25.8 %
:RPS:SCOP  1->67 1utxA  a.35.1.3 * 2e-12 38.5 %
:HMM:SCOP  1->67 1utxA_ a.35.1.3 * 3.7e-13 41.5 %
:RPS:PFM   16->61 PF01381 * HTH_3 1e-04 45.7 %
:HMM:PFM   5->61 PF01381 * HTH_3 2.7e-18 38.2 55/55  
:BLT:SWISS 1->68 YGZD_BACSU 2e-09 42.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO51091.1 GT:GENE ABO51091.1 GT:PRODUCT transcriptional regulator, XRE family GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 2809293..2809508 GB:FROM 2809293 GB:TO 2809508 GB:DIRECTION + GB:PRODUCT transcriptional regulator, XRE family GB:NOTE PFAM: helix-turn-helix domain protein KEGG: btl:BALH_4565 DNA-binding protein GB:PROTEIN_ID ABO51091.1 GB:DB_XREF GI:134053120 InterPro:IPR001387 LENGTH 71 SQ:AASEQ MKNYIREARTNRLFKITQNDLAKAVGIHPSQMSQIERGVYKPSLTLALKISKVLKVPLDDLFKLEPEDWKK GT:EXON 1|1-71:0| BL:SWS:NREP 1 BL:SWS:REP 1->68|YGZD_BACSU|2e-09|42.4|66/66| BL:PDB:NREP 1 BL:PDB:REP 15->67|1utxA|1e-08|43.4|53/66| RP:PDB:NREP 1 RP:PDB:REP 5->68|3clcA|3e-11|25.8|62/76| RP:PFM:NREP 1 RP:PFM:REP 16->61|PF01381|1e-04|45.7|46/55|HTH_3| HM:PFM:NREP 1 HM:PFM:REP 5->61|PF01381|2.7e-18|38.2|55/55|HTH_3| GO:PFM:NREP 1 GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF01381|IPR001387| RP:SCP:NREP 1 RP:SCP:REP 1->67|1utxA|2e-12|38.5|65/66|a.35.1.3| HM:SCP:REP 1->67|1utxA_|3.7e-13|41.5|65/0|a.35.1.3|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 8 OP:NHOMOORG 8 OP:PATTERN -----------------------------------1-------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-1-----------11----------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 70 STR:RPRED 98.6 SQ:SECSTR cccHHHHHHHHTc#TccHHHHHHHHTccHHHHHHHHTTcccccHHHHHHHHHHHTccHHHHHHHHHHHccc DISOP:02AL 1-1,67-72| PSIPRED cccHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHccccHHHcc //