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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO51166.1
DDBJ      :             putative PAS/PAC sensor protein
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  91/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.110.3
:395 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   90->393 3caxA PDBj 6e-55 39.9 %
:RPS:PDB   272->393 3caxA PDBj 2e-09 37.2 %
:RPS:SCOP  276->379 3c2wA3  d.110.3.9 * 4e-07 12.2 %
:HMM:SCOP  276->376 1otdA_ d.110.3.1 * 1.2e-08 24.0 %
:RPS:PFM   14->83 PF04282 * DUF438 3e-16 57.1 %
:RPS:PFM   274->378 PF00989 * PAS 8e-05 28.6 %
:HMM:PFM   14->91 PF04282 * DUF438 3e-33 50.0 78/79  
:HMM:PFM   93->147 PF01814 * Hemerythrin 6.1e-10 23.6 55/59  
:HMM:PFM   159->211 PF01814 * Hemerythrin 1.1e-05 18.9 53/59  
:HMM:PFM   279->379 PF08448 * PAS_4 7.1e-10 23.8 101/110  
:BLT:SWISS 27->84 DNAK_THETN 7e-04 32.8 %
:BLT:SWISS 126->201 RCMNS_SALTY 5e-04 34.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO51166.1 GT:GENE ABO51166.1 GT:PRODUCT putative PAS/PAC sensor protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 2879600..2880787 GB:FROM 2879600 GB:TO 2880787 GB:DIRECTION + GB:PRODUCT putative PAS/PAC sensor protein GB:NOTE TIGRFAM: PAS sensor protein PFAM: protein of unknown function DUF438; Hemerythrin HHE cation binding domain protein; PAS fold-4 domain protein KEGG: tte:TTE2479 hypothetical protein GB:PROTEIN_ID ABO51166.1 GB:DB_XREF GI:134053195 InterPro:IPR000014 InterPro:IPR007380 InterPro:IPR012312 InterPro:IPR013656 LENGTH 395 SQ:AASEQ MSEYLGNKEAKQQMLKTIIKDLHQGKDFNQVKADFQNLIKDIDASEIANMEQALIGEGMNPEEITKLCDVHAAVFRDALEENEKPNLILGHPMYTIKHENEEIKKALEELDNYFSSNQMDAFKDRLSFFRDNLDRHYSKKENILFPYLERHNITGPPSVMWSVDDEIRDMGKILLTRVKEGDAGAIKTAYETMKNKISEMIFKEENILTPMLLETLTEEEWAEIKQEDEEFGVVFSKPHGNFWQPKAVTTKNISFEPTGEALSLDTGFLTLEQINTILTNIPIDITFVDKDDTVRYFSQGRERIFVRTKSIIGRKVQNCHPPDSVHMVEKILSDFKHGKHSTAEFWLELAEKFIHIRYFALRDEQGHYVGTMEVSQDVTGIRSLEGERRLLQYED GT:EXON 1|1-395:0| BL:SWS:NREP 2 BL:SWS:REP 27->84|DNAK_THETN|7e-04|32.8|58/606| BL:SWS:REP 126->201|RCMNS_SALTY|5e-04|34.2|76/220| SEG 208->220|ltpmlletlteee| BL:PDB:NREP 1 BL:PDB:REP 90->393|3caxA|6e-55|39.9|301/355| RP:PDB:NREP 1 RP:PDB:REP 272->393|3caxA|2e-09|37.2|121/355| RP:PFM:NREP 2 RP:PFM:REP 14->83|PF04282|3e-16|57.1|70/78|DUF438| RP:PFM:REP 274->378|PF00989|8e-05|28.6|98/112|PAS| HM:PFM:NREP 4 HM:PFM:REP 14->91|PF04282|3e-33|50.0|78/79|DUF438| HM:PFM:REP 93->147|PF01814|6.1e-10|23.6|55/59|Hemerythrin| HM:PFM:REP 159->211|PF01814|1.1e-05|18.9|53/59|Hemerythrin| HM:PFM:REP 279->379|PF08448|7.1e-10|23.8|101/110|PAS_4| GO:PFM:NREP 1 GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00989|IPR013767| RP:SCP:NREP 1 RP:SCP:REP 276->379|3c2wA3|4e-07|12.2|98/113|d.110.3.9| HM:SCP:REP 276->376|1otdA_|1.2e-08|24.0|100/0|d.110.3.1|1/1|PYP-like sensor domain (PAS domain)| OP:NHOMO 110 OP:NHOMOORG 99 OP:PATTERN --1-1------------------1------------------------------11---11---1--- --1---------------------------------------------------------------------------11--------------11----1---------------------------------------------------------------------------------------11--------------------111-----------------------------------1----11----11222--22--1--1--111-------11111111111111-------------11111------121-111111111-1----111-111------11-1----11--1--11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--111----1------121------------------------2---1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------1-1111222--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 302 STR:RPRED 76.5 SQ:SECSTR #########################################################################################TcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTHHHHHHHHTHHHHHTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGccHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHccHHHHHHHHHHGGGTccccccccc##cccHHTTTcccccccccTcEEccccEEcHHHHHHHHHHcccEEEEEcTTccEEEEccccccccccGGGTTccTTTcccGGGHHHHHHHHHHHHHHTccccEEEEEEETTEEEEEEEEEEEcTTccEEEEEEEEEEcHHHHTcccccccccc## DISOP:02AL 1-1,5-5,246-258,392-396| PSIPRED ccHHHccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccEEcccccccHHHHHHHHHHcccEEEEEccccEEEEEcccHHHHccccHHHccccHHHHccHHHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEEEEEEcccccEEEEEEEEEccHHHHHHHHHHHHHcccc //