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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO51256.1
DDBJ      :             glycyl-radical enzyme activating protein family
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  330/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
d.218.1d.58.1
:310 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->54,116->306 3cb8A PDBj 1e-26 33.3 %
:BLT:PDB   73->112 2ivfB PDBj 5e-06 45.0 %
:RPS:PDB   15->48 3cb8A PDBj 2e-06 41.2 %
:RPS:PDB   59->114 1durA PDBj 9e-09 31.4 %
:RPS:PDB   139->276 3canA PDBj 1e-19 34.3 %
:RPS:SCOP  30->114 1hfeL2  d.58.1.5 * 1e-10 25.0 %
:RPS:SCOP  182->288 2o5aA1  d.218.1.12 * 1e-13 10.2 %
:HMM:SCOP  38->140 2fug91 d.58.1.5 * 1.3e-19 29.0 %
:HMM:PFM   32->251 PF04055 * Radical_SAM 3.1e-31 29.5 156/166  
:BLT:SWISS 15->284 PFLE_ECOLI 1e-51 41.3 %
:PROS 97->108|PS00198|4FE4S_FER_1
:PROS 26->47|PS01087|RADICAL_ACTIVATING

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO51256.1 GT:GENE ABO51256.1 GT:PRODUCT glycyl-radical enzyme activating protein family GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2982876..2983808) GB:FROM 2982876 GB:TO 2983808 GB:DIRECTION - GB:PRODUCT glycyl-radical enzyme activating protein family GB:NOTE TIGRFAM: glycyl-radical enzyme activating protein family PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Radical SAM domain protein KEGG: dsy:DSY0417 pyruvate-formate lyase-activating enzyme GB:PROTEIN_ID ABO51256.1 GB:DB_XREF GI:134053285 InterPro:IPR001450 InterPro:IPR001989 InterPro:IPR007197 InterPro:IPR012839 LENGTH 310 SQ:AASEQ MVAATNFDKKKYGYVFNVQRYSVHDGPGIRTIVFLKGCPLRCQWCANPESQHFHPELAYNANKCISIKECGWCIKSCETEAIKHDQNGKITVDRERCTNCGKCTDICPSKALNMYGELKRVDEVIELVEQDSSFYMRSGGGITLSGGEPLVQAEFALEVLKEAKRRRLNTAIETCGYADWEKAVTVFEYVDNILFDIKSINSTRHKQFTGVGNETILENFKKLCNCFPNTPITVRTPVIPGFNDTEQDILAIIDFIKCYPNVKYEILAYHRLGEPKYTYIGREYLLSGVKPIPEERISTLKKLVQENFPQ GT:EXON 1|1-310:0| BL:SWS:NREP 1 BL:SWS:REP 15->284|PFLE_ECOLI|1e-51|41.3|264/308| PROS 97->108|PS00198|4FE4S_FER_1|PDOC00176| PROS 26->47|PS01087|RADICAL_ACTIVATING|PDOC00834| BL:PDB:NREP 2 BL:PDB:REP 13->54,116->306|3cb8A|1e-26|33.3|231/244| BL:PDB:REP 73->112|2ivfB|5e-06|45.0|40/337| RP:PDB:NREP 3 RP:PDB:REP 15->48|3cb8A|2e-06|41.2|34/244| RP:PDB:REP 59->114|1durA|9e-09|31.4|51/55| RP:PDB:REP 139->276|3canA|1e-19|34.3|134/158| HM:PFM:NREP 1 HM:PFM:REP 32->251|PF04055|3.1e-31|29.5|156/166|Radical_SAM| RP:SCP:NREP 2 RP:SCP:REP 30->114|1hfeL2|1e-10|25.0|80/85|d.58.1.5| RP:SCP:REP 182->288|2o5aA1|1e-13|10.2|98/108|d.218.1.12| HM:SCP:REP 38->140|2fug91|1.3e-19|29.0|100/0|d.58.1.5|1/1|4Fe-4S ferredoxins| OP:NHOMO 683 OP:NHOMOORG 340 OP:PATTERN -----------------------1----------1-----------------------1-1---1--- -----11-----------------------------------------1-------------1-1------11111112--1------2232-3----------------------------------------------------1-1----11----------1----------------------11--1-111111111111111--11--1111----11111111-1111111111111111111--1---11-----22--1111----11122222222222222222222222222222222222221112222-6314444445454414334222322-1111--33-411111-----112-----------------1---3--1------------------------------------------------------------------2----------------------------------1--------------------------------------------------------1-----------1-1-6212-3321322--12--11-2------------------------------------413-------11222212211121222222--1----------42112314445455544-4444445454454444445243121134243434433434334244444441-211111111111------------------111111111-11--1---------------------------------------22221111123222----------------------------------1-------------------------1-----1-----1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--1-1---------4----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 298 STR:RPRED 96.1 SQ:SECSTR ############TTcccccccccHHHHHHHHHHHHHHHcGGGTTTcccTHHHHcccccEEcTTccccccccccGGGcTTccEEcccccccEEcTcccTTccccTTTcGGGccTTccEEEcHHHHHHHHGGGHHHHTcTcccEEEcccTGGGcHHHHHHHHHHHHHTTccEEEEcTTcccHHHHHHHHTcccEEEEEcccccHHHHHHHHccccHHHHHHHHHHHHTTccEcEEEEEEEccTTTccHHHHHHHHHHHHHccccccEEEEccccccccHHHTTcccTTTTcccccHHHHHHHHHHHHTTccE DISOP:02AL 1-4,6-6,310-311| PSIPRED ccccccccccEEEEEEEEEEEEEEccccccEEEEEEcccccccHHccccccccccEEEEEccHHEEcccccHHHHHcccccEEEccccEEEEEHHHcccccccHHHHcccccEEEEEccHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHccEEEEEEccccHHHHHHHHcccHHHHHHHHHHHHHHccccEEEEEEEEEccccccHHHHHHHHHHHHHccccEEEEEcccccccccHHHccccccccccccccHHHHHHHHHHHHHHccc //