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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO51260.1
DDBJ      :             TRAP dicarboxylate transporter, DctM subunit
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  338/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
:628 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   38->172 PF04290 * DctQ 6e-14 31.0 %
:RPS:PFM   210->619 PF06808 * DctM 3e-57 34.7 %
:HMM:PFM   210->619 PF06808 * DctM 3.4e-121 38.6 409/416  
:HMM:PFM   38->175 PF04290 * DctQ 4.9e-36 35.6 132/133  
:BLT:SWISS 16->101 Y1030_HAEIN 3e-06 30.4 %
:BLT:SWISS 216->621 Y1029_HAEIN 1e-62 39.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO51260.1 GT:GENE ABO51260.1 GT:PRODUCT TRAP dicarboxylate transporter, DctM subunit GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2988090..2989976) GB:FROM 2988090 GB:TO 2989976 GB:DIRECTION - GB:PRODUCT TRAP dicarboxylate transporter, DctM subunit GB:NOTE TIGRFAM: TRAP dicarboxylate transporter, DctM subunit PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; Tripartite ATP-independent periplasmic transporter, DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit KEGG: dsy:DSY0419 hypothetical protein GB:PROTEIN_ID ABO51260.1 GB:DB_XREF GI:134053289 InterPro:IPR004669 InterPro:IPR004680 InterPro:IPR004681 InterPro:IPR007387 InterPro:IPR010656 LENGTH 628 SQ:AASEQ MANNITQNDIQNAKPKSLLRWLDDNLEKPILFIGMLSIILIITYQTAYRYIITHMYEGSGAATWTEELARYIFIWISYLAIPLAVKTRNNIRVDIIYDRLPKRFQKVSWIIVDVCFLCLSVVVFLKGLGHLEMLLNMPQTTPALQIPYFIPYLILPIGFGLISLRVIQDLVRQVKECGIKDSLIGAIFCGVIASPLLLGIELDALVWLFGYFSIFLVIGVPIAIALGLSGLATIIGANTLPIDYVAQLSFTSIDSFPIMAIPFFIAAGVFMGAGGLSKRLLALADEMLGSLYGGMALATIATCMFFAAISGSGPATVAAIGALTIPAMIERGYDKHFAAALVACAGAIGVMIPPSNPFVVYGVSAQASVGKLFIGGIVPGVLTGLVLMGISYFYSKKNNWKGEERERNFGTFVKAFWDAKWALMVPVIILGGIYGGFMTPTEAAAVSAFYGLIVGVFVYKEINLKNITECFMEACSTSAVVIVLMSMATIFGNIMTIEQVPNKIAEFILGITENKIMILLMINILLLIVGTFMEALAAIVILTPILLPIVTKVGVDPIHFGVIMVVNLALGFITPPVGVNLFVASGVAKLKIEDLAKSAMPLLGAMIVVLLLVTYVPSISLFLTTLIK GT:EXON 1|1-628:0| BL:SWS:NREP 2 BL:SWS:REP 16->101|Y1030_HAEIN|3e-06|30.4|79/161| BL:SWS:REP 216->621|Y1029_HAEIN|1e-62|39.5|397/425| TM:NTM 16 TM:REGION 26->48| TM:REGION 65->86| TM:REGION 108->130| TM:REGION 147->169| TM:REGION 179->201| TM:REGION 213->235| TM:REGION 255->277| TM:REGION 301->323| TM:REGION 333->355| TM:REGION 366->388| TM:REGION 412->434| TM:REGION 442->464| TM:REGION 471->493| TM:REGION 523->545| TM:REGION 563->585| TM:REGION 601->623| SEG 112->125|vdvcflclsvvvfl| SEG 146->157|ipyfipylilpi| SEG 338->347|aaalvacaga| SEG 516->528|imillminillli| SEG 536->551|laaiviltpillpivt| RP:PFM:NREP 2 RP:PFM:REP 38->172|PF04290|6e-14|31.0|129/133|DctQ| RP:PFM:REP 210->619|PF06808|3e-57|34.7|409/412|DctM| HM:PFM:NREP 2 HM:PFM:REP 210->619|PF06808|3.4e-121|38.6|409/416|DctM| HM:PFM:REP 38->175|PF04290|4.9e-36|35.6|132/133|DctQ| OP:NHOMO 1136 OP:NHOMOORG 345 OP:PATTERN --1-------------------------1-------------------------------1------- -------11111-------------2------------------1-1-------1-----------1---1----------------------1----------1-----------------------------1111111------1--11------------1-----1---------------3311-------------------8311------11-6------------------------------1----------------------------------------------------------------------71-----------------------2--11--45-2-1--21-----2-----11--------D9A11363454--------1-7-22322523B11-2881337533BD74212LJGABEGHCO--------1----422-----------------------------3-----2NIAI2222211----2231-----2213526213---C375565K8D63131---13--------1-455-3G384741-6332-1211-111-1121---4122-1-------1--------1311------334-4-A21111-1-111111--114---1211------21--11-1--3133322--212333131-22111116---1111-3-323223333232222-1-222---111111111111---1----------37HR---714-2322-446-------11-1-3333-112711125121---------1--163333333547--11111---------2-11------------11-------------------------------11121--- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1------------------------2-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5,399-410| PSIPRED ccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //