[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO51264.1
DDBJ      :             methyl-accepting chemotaxis sensory transducer
Swiss-Prot:             

Homologs  Archaea  26/68 : Bacteria  484/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
a.274.1d.110.6d.92.1h.4.5
:639 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   149->293 3c8cA PDBj 3e-10 32.5 %
:BLT:PDB   357->609 2ch7A PDBj 6e-15 26.1 %
:RPS:PDB   44->294 3e4pA PDBj 1e-23 12.9 %
:RPS:PDB   323->377 2aswA PDBj 2e-09 29.1 %
:RPS:PDB   361->639 2ch7A PDBj 7e-34 21.9 %
:RPS:SCOP  45->206 2p7jA2  d.110.6.2 * 3e-08 16.6 %
:RPS:SCOP  325->377 2aswA1  a.274.1.1 * 2e-08 30.2 %
:RPS:SCOP  394->610 3cmnA1  d.92.1.16 * 1e-28 4.7 %
:HMM:SCOP  144->210 2basA2 d.110.6.2 * 3.2e-06 27.4 %
:HMM:SCOP  344->640 2ch7B1 h.4.5.1 * 1.1e-68 37.2 %
:RPS:PFM   163->234 PF02743 * Cache_1 2e-11 38.9 %
:RPS:PFM   309->373 PF00672 * HAMP 3e-07 32.8 %
:RPS:PFM   447->639 PF00015 * MCPsignal 2e-20 32.6 %
:HMM:PFM   442->639 PF00015 * MCPsignal 1.4e-51 37.9 198/213  
:HMM:PFM   163->238 PF02743 * Cache_1 3.9e-16 30.7 75/80  
:HMM:PFM   305->373 PF00672 * HAMP 1.9e-12 27.9 68/70  
:HMM:PFM   350->427 PF07200 * Mod_r 6.5e-05 10.3 78/150  
:BLT:SWISS 149->611 TLPA_BACSU 8e-44 32.2 %
:PROS 186->197|PS00213|LIPOCALIN
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO51264.1 GT:GENE ABO51264.1 GT:PRODUCT methyl-accepting chemotaxis sensory transducer GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 2993618..2995537 GB:FROM 2993618 GB:TO 2995537 GB:DIRECTION + GB:PRODUCT methyl-accepting chemotaxis sensory transducer GB:NOTE PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer KEGG: oih:OB2102 methyl-accepting chemotaxis protein GB:PROTEIN_ID ABO51264.1 GB:DB_XREF GI:134053293 InterPro:IPR002345 InterPro:IPR003660 InterPro:IPR004010 InterPro:IPR004089 LENGTH 639 SQ:AASEQ MFKNKTSLNFQISFIFIALLIISIVTISYYTLYNLKKEIEKVTLESQQTKAKSVVMNVEDFINTSMTIVRFSSNLPEVKDMSAVSLIREEFKGVPENADLEKRNIAKSLLKEYPDFAYFESFTGDKGINIMLEPYKYQVGLSRMDFAFRDWFKGATGSMNTYISEVYLSASINKHVVAISTPIKDEYSQLTGVWLGALTLDVLSEKVKNLTFGRTGKIYLVDKNGVIAAHPNKEFTSKITKLDKHPIVSKLLNGQSGTGYYYEPLEKTDVIATFMPVGKTGWGVVVEQSVSEAFGFLNDITHNVIITSLVVSLLAMLFVLCYTRRITKPIDNISTLAAHVAQGDLNVEVQVCHSNSDLEKLTTSFKLMVEHLKNLIEEITLEGQRVHETAKQLSVSTQQTSIVASENASAMSQISSAVENVSDSTIRVSGHSQKVINLAQDGKVAIDNVIKQMDNISNSTNRVSSVVSNLTDNSSKITQIVDLINQIAEQTNLLALNAAIEAARAGEYGRGFSVVADEVKRLSEQSSAATKEIYQLISNIHRDSHTAVASIGENVGVVKDGITITSQAGDSFENINQLLQTLNNEITSVAASIEQIAAGIQHIAGSTEEQTASSEEIASLSESLLTVANQLNKTAEKFK GT:EXON 1|1-639:0| BL:SWS:NREP 1 BL:SWS:REP 149->611|TLPA_BACSU|8e-44|32.2|451/662| PROS 186->197|PS00213|LIPOCALIN|PDOC00187| TM:NTM 1 TM:REGION 11->33| SEG 12->24|isfifialliisi| SEG 457->469|snstnrvssvvsn| SEG 493->505|llalnaaieaara| SEG 612->625|asseeiaslsesll| BL:PDB:NREP 2 BL:PDB:REP 149->293|3c8cA|3e-10|32.5|126/238| BL:PDB:REP 357->609|2ch7A|6e-15|26.1|253/309| RP:PDB:NREP 3 RP:PDB:REP 44->294|3e4pA|1e-23|12.9|233/254| RP:PDB:REP 323->377|2aswA|2e-09|29.1|55/56| RP:PDB:REP 361->639|2ch7A|7e-34|21.9|279/309| RP:PFM:NREP 3 RP:PFM:REP 163->234|PF02743|2e-11|38.9|72/79|Cache_1| RP:PFM:REP 309->373|PF00672|3e-07|32.8|64/69|HAMP| RP:PFM:REP 447->639|PF00015|2e-20|32.6|193/210|MCPsignal| HM:PFM:NREP 4 HM:PFM:REP 442->639|PF00015|1.4e-51|37.9|198/213|MCPsignal| HM:PFM:REP 163->238|PF02743|3.9e-16|30.7|75/80|Cache_1| HM:PFM:REP 305->373|PF00672|1.9e-12|27.9|68/70|HAMP| HM:PFM:REP 350->427|PF07200|6.5e-05|10.3|78/150|Mod_r| GO:PFM:NREP 7 GO:PFM GO:0016020|"GO:membrane"|PF02743|IPR004010| GO:PFM GO:0004871|"GO:signal transducer activity"|PF00672|IPR003660| GO:PFM GO:0007165|"GO:signal transduction"|PF00672|IPR003660| GO:PFM GO:0016021|"GO:integral to membrane"|PF00672|IPR003660| GO:PFM GO:0004871|"GO:signal transducer activity"|PF00015|IPR004089| GO:PFM GO:0007165|"GO:signal transduction"|PF00015|IPR004089| GO:PFM GO:0016020|"GO:membrane"|PF00015|IPR004089| RP:SCP:NREP 3 RP:SCP:REP 45->206|2p7jA2|3e-08|16.6|151/172|d.110.6.2| RP:SCP:REP 325->377|2aswA1|2e-08|30.2|53/54|a.274.1.1| RP:SCP:REP 394->610|3cmnA1|1e-28|4.7|212/294|d.92.1.16| HM:SCP:REP 144->210|2basA2|3.2e-06|27.4|62/0|d.110.6.2|1/1|Sensory domain-like| HM:SCP:REP 344->640|2ch7B1|1.1e-68|37.2|285/0|h.4.5.1|1/1|Methyl-accepting chemotaxis protein (MCP) signaling domain| OP:NHOMO 4732 OP:NHOMOORG 517 OP:PATTERN ------------------------9AB9-116---2--4654433-2A-1112-3-2-43-------1 -4--------------------------------------1---7---3-------------5-A---------------1---4311--------------------4-----------------------2-2-13322---1234557711122------222-3393--------------3-----3E7CCCCCDAGCD9CEEB7BA9B9CDC643d667111111NF------------------------------------------------------------------------------------------5IHQhHHHIHJIGHQD-MLB---LDC--277F3PQAE86GB7423733--1A--336-----2-BEK1236H25C------------1151111611--5CCKDDCBDC87K-7-5-1-233222----------221-ZFI-------------------------------2--2A5334DBCABBWBABB88GKCCCC6ACGK8IAC--99DA5I66I14A228CC365AOD-------12218DAF94I-7A3DE78D1INJLCNMCD4574I4452133------2-3------132-4---VJ-AA9EB3D-HNSRRDHGNJJQFHDIPPJ--11499------9FWW5G74443433344-4434433434434444443---TS118765577777665755742413333--A56676767776---1---------21K9V---------------111111-11179HHGFJOOZDDEFNNZYb---------9AUTRTTTTTGJQaZ33BADAC5661111--AXBB2222221-1111D1--------------------------4-A6855645-1- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1---------11----------2--3-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 597 STR:RPRED 93.4 SQ:SECSTR ####################################GGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHc######HHHcccHHHHHHHHHHHHHHHHHHTccEEEEEEETTccEEEETTTTcTTccTTcccTTcHHHHHHHHHcccEEEEEEEcTTTccEEEEEEEEEEccTccEEccEEEEEEEEEccHHHHHHHHTTTccEEEEcTTccEEEEccGGGTTccccccccTTcHHHHHccccEEEEEEcTTccEEEEEEcccccEEEEEEEEEEcTTccHHHHHHHTcTTccHHHHHHHTHHTccccHHHHGccEEEETTEEEEEcTTcTTTcccEEEEcTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DISOP:02AL 1-4,40-53,81-83,236-242,379-413,420-474,525-533,543-570,585-632,634-637,639-640| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccEEEEEEccccEEEEcccccccccccccccccHHHHHHHHcccEEEcccEEccccccEEEEEEEEEEcccccEEEEEEEcccHHHHHHHHHHccccccEEEEEEcccccEEEcccHHHHcccccccccHHHHHHHHcccccEEEEEEEccEEEEEEEEEcccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc //