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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO51282.1
DDBJ      :             transcriptional regulator, TetR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  34/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:205 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->176 2eh3A PDBj 1e-07 24.7 %
:RPS:PDB   16->202 3c2bA PDBj 7e-20 12.3 %
:RPS:SCOP  14->83 3c07A1  a.4.1.9 * 3e-11 27.1 %
:RPS:SCOP  90->202 1vi0A2  a.121.1.1 * 4e-10 15.9 %
:HMM:SCOP  4->92 1t33A1 a.4.1.9 * 1.9e-16 30.7 %
:HMM:SCOP  87->202 1vi0A2 a.121.1.1 * 4e-13 22.4 %
:RPS:PFM   20->66 PF00440 * TetR_N 7e-05 38.3 %
:RPS:PFM   68->196 PF08359 * TetR_C_4 8e-07 22.5 %
:HMM:PFM   20->64 PF00440 * TetR_N 5.2e-19 40.0 45/47  
:HMM:PFM   70->184 PF08359 * TetR_C_4 0.00034 19.1 115/133  
:BLT:SWISS 10->101 BM3R1_BACME 4e-10 33.7 %
:PROS 32->63|PS01081|HTH_TETR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO51282.1 GT:GENE ABO51282.1 GT:PRODUCT transcriptional regulator, TetR family GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 3014038..3014655 GB:FROM 3014038 GB:TO 3014655 GB:DIRECTION + GB:PRODUCT transcriptional regulator, TetR family GB:NOTE PFAM: regulatory protein, TetR KEGG: dsy:DSY1524 hypothetical protein GB:PROTEIN_ID ABO51282.1 GB:DB_XREF GI:134053311 InterPro:IPR001647 LENGTH 205 SQ:AASEQ MAYRQTNKVMEKLQSKKKEILTAAREVFAENSYQRTSIKAIAQKAKIATGTFYLYFRNKDALINMIVEEMFYELLESIRNERANFSDGFDKLQASMETCIKLFIKEKNMAKILLVQVPGVNNAFNAKLIDIENELIKLTKEDLDELKSQGRIPNEDTFVSALAFVGSFRQVIINWLREGKPEDLEVSVATLMKYNLRGMGKRDVS GT:EXON 1|1-205:0| BL:SWS:NREP 1 BL:SWS:REP 10->101|BM3R1_BACME|4e-10|33.7|92/192| PROS 32->63|PS01081|HTH_TETR_1|PDOC00830| SEG 38->48|ikaiaqkakia| BL:PDB:NREP 1 BL:PDB:REP 17->176|2eh3A|1e-07|24.7|146/170| RP:PDB:NREP 1 RP:PDB:REP 16->202|3c2bA|7e-20|12.3|187/198| RP:PFM:NREP 2 RP:PFM:REP 20->66|PF00440|7e-05|38.3|47/47|TetR_N| RP:PFM:REP 68->196|PF08359|8e-07|22.5|129/132|TetR_C_4| HM:PFM:NREP 2 HM:PFM:REP 20->64|PF00440|5.2e-19|40.0|45/47|TetR_N| HM:PFM:REP 70->184|PF08359|0.00034|19.1|115/133|TetR_C_4| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 2 RP:SCP:REP 14->83|3c07A1|3e-11|27.1|70/75|a.4.1.9| RP:SCP:REP 90->202|1vi0A2|4e-10|15.9|113/117|a.121.1.1| HM:SCP:REP 4->92|1t33A1|1.9e-16|30.7|88/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 87->202|1vi0A2|4e-13|22.4|116/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 38 OP:NHOMOORG 34 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------11---------------------------------------------------11-----------------------------------------------------111111111111111-1----1111111--------------------------------------------------------------------------------------------------------------------------------------33-11----1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 202 STR:RPRED 98.5 SQ:SECSTR cc#TcccccccHHccHHHHHHHHHHHHHHHHcGGGccHHHHHHHHTccHHHHHHHHccHHHHHHHHHHHHTcccccccccccccHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHcccHHHHHHHHTTHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHTTHHHHHTTccccccHHHHHHHHHHHHHHHHccHc## DISOP:02AL 1-19,203-206| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccc //