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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO51287.1
DDBJ      :             phage integrase family protein
Swiss-Prot:             

Homologs  Archaea  19/68 : Bacteria  475/915 : Eukaryota  1/199 : Viruses  34/175   --->[See Alignment]
a.60.9d.163.1
:367 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   58->347 2a3vB PDBj 6e-12 29.0 %
:RPS:PDB   63->330 5crxB PDBj 2e-28 12.3 %
:RPS:SCOP  62->164 1crxA1  a.60.9.1 * 3e-08 8.9 %
:RPS:SCOP  159->349 1crxA2  d.163.1.1 * 2e-20 13.2 %
:HMM:SCOP  164->343 1a0pA2 d.163.1.1 * 7.8e-38 36.2 %
:RPS:PFM   186->343 PF00589 * Phage_integrase 2e-17 40.0 %
:HMM:PFM   164->346 PF00589 * Phage_integrase 2e-36 36.1 166/173  
:HMM:PFM   14->46 PF06717 * DUF1202 0.00023 30.3 33/308  
:BLT:SWISS 12->356 XERCL_THETN 7e-27 28.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO51287.1 GT:GENE ABO51287.1 GT:PRODUCT phage integrase family protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(3019218..3020321) GB:FROM 3019218 GB:TO 3020321 GB:DIRECTION - GB:PRODUCT phage integrase family protein GB:NOTE PFAM: phage integrase family protein KEGG: bce:BC1272 DNA integration/recombination/invertion protein GB:PROTEIN_ID ABO51287.1 GB:DB_XREF GI:134053316 InterPro:IPR002104 LENGTH 367 SQ:AASEQ MAQIKLLKTGVYNITVYLGKDNQGKKVTKSKVFHGKKREAEQFAKIFETKLRKSLQPGSQMLVSDYLDYWLKRIQPSIEERTFKTYSWHLKRLKETLGDIELGELKVLLVQERLNELKDISETSVRKITTTFRTALRQAVVWELLEKDPTVGLRLPRNPKKEKKVLSSDELIKFLNAAKEYKYYLVLRILAVTGMRLGECLGLMWKDLNFDKGTMKILRSADSKTRKVLDKPKNDSSRRTVTIDKETVELLKTHRKKQAKRKVTSIRIEDELVFHVNGRPITHKAIDRTIKTALKKAELPMIRIHDLRHTAGSILLDAGYSLPTVSSLLGHSTPATTAAIYSHAIRRDINVTDALSHSEIQSEKNIK GT:EXON 1|1-367:0| BL:SWS:NREP 1 BL:SWS:REP 12->356|XERCL_THETN|7e-27|28.6|343/391| BL:PDB:NREP 1 BL:PDB:REP 58->347|2a3vB|6e-12|29.0|272/320| RP:PDB:NREP 1 RP:PDB:REP 63->330|5crxB|2e-28|12.3|261/296| RP:PFM:NREP 1 RP:PFM:REP 186->343|PF00589|2e-17|40.0|140/168|Phage_integrase| HM:PFM:NREP 2 HM:PFM:REP 164->346|PF00589|2e-36|36.1|166/173|Phage_integrase| HM:PFM:REP 14->46|PF06717|0.00023|30.3|33/308|DUF1202| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 2 RP:SCP:REP 62->164|1crxA1|3e-08|8.9|101/110|a.60.9.1| RP:SCP:REP 159->349|1crxA2|2e-20|13.2|190/212|d.163.1.1| HM:SCP:REP 164->343|1a0pA2|7.8e-38|36.2|163/182|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 1085 OP:NHOMOORG 529 OP:PATTERN --1-1---1111111-1-----------------1--1-124--11---------1------1----- 122--111111---131----2--2111111113-611-1-2471---1-------3----15-11-423-222251123243---112332--------11211121--1------11----------1-1--21------12-3-11--------------------7-------------41---111231445455234442333134433244223341-A233463-56443435436665343254B31338243347633553A4131567656223-1211--2141231232333256312231552126464412245322422462554432321-3111341-4147-3122214151-1133-----------1--11----------------1-11-1----11-11------1------2--1-1-1---1--------------11---------11F4--11---1------1------1-1-----11----------------1------------1-21---11-----11221-1-------1-111312121-1-1B-1-11-1----212-13-2112-21-1------1--------3---1----121---11113--2--12----1---1----1-1-------11---1-1111111111-1113112111111111111111-11111111111111111111-1111111--212112222111---1------122-1---------------21-121111---21-1111-1111---1-2---1111111121--1-----1-11121--------------------11----------1------1--1----------------1----1----11 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- -1-------1-----1-------------------------------------------------------------1----11111-1---1---1-1111---1111-11-1--1---1----1-1--1-1--11-1--1-----1--------------------------- STR:NPRED 298 STR:RPRED 81.2 SQ:SECSTR #########################################################cHHHHHHHHHHHHHHHTGGGccHHHHHHHHHHHHHHHHHHTTcccccccHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHTTccccGGGcHHHHHHHHHHHHHHHHTTccccHHHTTcccHHHHHHHHHHHHHHHHcccHHHHTTccGGGEEEcTTccEEEEEEEETTEEccccEEEEEEEEEEEccHHHHHHHHHHHHHHTGGGcTTccccccccccHHHHHHHHHHHHHHHHccccccccccccTTHHHHHHHHHHHTTTccHHHHHHHHcccccHHHHHHHcccHHHccHHHHHH############ DISOP:02AL 1-1,359-368| PSIPRED ccEEEEccccEEEEEEEEEEcccccEEEEEccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHcccHHHccccccEEEEEccccccccEEccccccccccEEEEccHHHHHHHHHHHHHHHHHccccccccccEEEccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccc //