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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO51438.1
DDBJ      :             Extracellular ligand-binding receptor
Swiss-Prot:             

Homologs  Archaea  15/68 : Bacteria  419/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.93.1
:386 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   34->258 1usgA PDBj 8e-20 30.4 %
:RPS:PDB   33->377 3eafA PDBj 2e-38 19.5 %
:RPS:SCOP  34->368 1usgA  c.93.1.1 * 1e-59 23.9 %
:HMM:SCOP  34->382 1usgA_ c.93.1.1 * 2e-79 38.5 %
:RPS:PFM   48->362 PF01094 * ANF_receptor 5e-44 41.3 %
:HMM:PFM   70->365 PF01094 * ANF_receptor 4.3e-31 22.3 292/348  
:HMM:PFM   4->23 PF08085 * Entericidin 0.00036 45.0 20/42  
:BLT:SWISS 36->376 LIVB3_BRUME 2e-26 29.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO51438.1 GT:GENE ABO51438.1 GT:PRODUCT Extracellular ligand-binding receptor GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(3178219..3179379) GB:FROM 3178219 GB:TO 3179379 GB:DIRECTION - GB:PRODUCT Extracellular ligand-binding receptor GB:NOTE PFAM: Extracellular ligand-binding receptor KEGG: lip:LI0496 branched chain amino acid ABC transporter, periplasmic amino acid-binding protein GB:PROTEIN_ID ABO51438.1 GB:DB_XREF GI:134053467 InterPro:IPR000437 InterPro:IPR001828 LENGTH 386 SQ:AASEQ MLRKKYFTIISLLLVAALVLAGCGGAEKQDAASDVIKIGVYEPLTGTNAAGGEMTVEGIKLANQLFPEVNGKKVELVVVDNKSEKQEAANAVERLVSKDKVNVIIGSYGSSLSMAGGPIAMDAGIPVIGCSPTNPAVTLGNDYYFRVCFIDPFQGTVMANYAVEKLGAKTAAIVQDVQQDYSVGLNNYFEKAFKQQTGNENAIVAKVNYNTGDKDFSSQLTTIKAKNPDVIFAPGNFLECGILVEKARELGITCPILGGDTWEAEEFLSRVKNTTGVYFSTHFDSTQPVTEMSKKFMDEYKKAYPEKQVNAFGALGFDAYILALDAIQKAGSADPKAIRDALANVKDFQGATGIITLDTNGDATKTAIIKKVADGKFAYEGKVDPK GT:EXON 1|1-386:0| BL:SWS:NREP 1 BL:SWS:REP 36->376|LIVB3_BRUME|2e-26|29.3|328/368| TM:NTM 1 TM:REGION 6->25| SEG 12->21|lllvaalvla| BL:PDB:NREP 1 BL:PDB:REP 34->258|1usgA|8e-20|30.4|217/345| RP:PDB:NREP 1 RP:PDB:REP 33->377|3eafA|2e-38|19.5|339/379| RP:PFM:NREP 1 RP:PFM:REP 48->362|PF01094|5e-44|41.3|300/319|ANF_receptor| HM:PFM:NREP 2 HM:PFM:REP 70->365|PF01094|4.3e-31|22.3|292/348|ANF_receptor| HM:PFM:REP 4->23|PF08085|0.00036|45.0|20/42|Entericidin| RP:SCP:NREP 1 RP:SCP:REP 34->368|1usgA|1e-59|23.9|326/345|c.93.1.1| HM:SCP:REP 34->382|1usgA_|2e-79|38.5|340/0|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 1390 OP:NHOMOORG 438 OP:PATTERN 11-1-1----------1-1112-12---2----------------1-1----------------3--- --1-2---------1------1---2------11111-1113251----1-------1--224-1-1111211111111---3------------1---------------------------------11--3--11111---3612-31122211------2-111-1-------------7523111-----------------------------3211--------41------------------------11-----11--11---11----1-11---11111111111111-------------1111111111221-41111111-1---11----2----4--63223372-111---21121-------1111-2EDC1166789766675754648-45A43D4A231-8223445536346B1--212--112-1--------4----624-----------------------------2-----9EBABCBECEC46665DDFA777757DCF7C67-3997813338CD9FJ456----43----------778289-12834A744523334152-23323211C1--1-222222----------11----111-1--------------------------------------3131-312222222222-22222222222222222224441111-2222222222212121322222221-111111111111---------------211-------------------------2-22222322222231222----------------------------------------2---------------1---------------------------311--14111-3- --------------------------------------------------------------------------------------------------------------------------------------------------------------2----1---------------------2--1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 349 STR:RPRED 90.4 SQ:SECSTR ############################ccEEcEEEEEEEEEccccTTHHHHHHHHHHHHHHHHHHHHTTccEEEEEEEEcTTcHHHHHHHHHHHHHTTcccEEEEccHHHHHHHHHHHHHHHTcEEEEEEccccGGGTTcTTEEcccccHHHHHHHHHHHHHHHHccEEEEEEEcTTcHHHHTTHHHHHHHTGGGTEEEEEEEEEEccTTccHHHHHHHHHHHTTcccEEEEcccHHHHHHHHHHHHHHTcccEEEEcGGGccTTHHHHHGGGTTcEEEEcccGGcTTcHHHHHHHHHHHTTccGGGccHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHccccTTcccccccccTTcccccEEEEEcTTccE######### DISOP:02AL 1-5| PSIPRED ccccHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEEcccccHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHcccEEEEEEcccccccccccEEEEEccccHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHcccEEEEEEccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccEEEEEEcccccccccEEEEEEEccEEEEEEEEccc //