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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO51452.1
DDBJ      :             efflux transporter, RND family, MFP subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  644/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
d.3.1d.41.2f.46.1
:376 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   44->300 3fppB PDBj 7e-24 26.8 %
:RPS:PDB   18->92 3bg5A PDBj 1e-08 13.3 %
:RPS:PDB   102->171 3d5kA PDBj 2e-05 22.9 %
:RPS:PDB   204->366 3bsdA PDBj 3e-09 8.3 %
:RPS:SCOP  52->112 1qpnA2  d.41.2.1 * 3e-09 18.0 %
:RPS:SCOP  127->365 1iu4A  d.3.1.8 * 3e-31 8.6 %
:HMM:SCOP  46->294 1vf7A_ f.46.1.1 * 3.6e-31 31.2 %
:RPS:PFM   61->241 PF00529 * HlyD 6e-12 35.4 %
:HMM:PFM   61->288 PF00529 * HlyD 7.7e-20 29.8 228/306  
:BLT:SWISS 33->353 MACA_YERPE 3e-33 27.7 %
:TM
:COIL
:REPEAT 2|81->125|127->170
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO51452.1 GT:GENE ABO51452.1 GT:PRODUCT efflux transporter, RND family, MFP subunit GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 3197733..3198863 GB:FROM 3197733 GB:TO 3198863 GB:DIRECTION + GB:PRODUCT efflux transporter, RND family, MFP subunit GB:NOTE TIGRFAM: efflux transporter, RND family, MFP subunit PFAM: secretion protein HlyD family protein KEGG: dsy:DSY3360 hypothetical protein GB:PROTEIN_ID ABO51452.1 GB:DB_XREF GI:134053481 InterPro:IPR006143 LENGTH 376 SQ:AASEQ MKRIVSLISLLLLIAISMGGCGEKPKAQEEKLVPVETIKVSTNDLAHTLSTTGEVIAGADVNVMPKATGRVQKVLVKVGDNVHKGQVLFQLEGNDARNAMDQAEAGLALAQANLERSQQGLKDSEINFERNKVLYDAQAISKVQFEQAESGLVTAQTNVKVSEAQVKQAQALVNTTQENYNNSTVTSPIDGTVAAVNVDPGEMVNPQTSPVTVVQIDTTKVKVNVSENVVDSIKPGSKVPVTINALNKTVNGTIFSVAPKADPSTRAFAVEIKLPNKNGEIKPGMVAKLDLSTGKSQGVLALPVDAVLERDGQYSVFILEEGKAKEISVKVGITSGELTEIKSGLKTGQTVIVKGNRLVGDGQKVKVVKELGGAAK GT:EXON 1|1-376:0| BL:SWS:NREP 1 BL:SWS:REP 33->353|MACA_YERPE|3e-33|27.7|321/371| COIL:NAA 33 COIL:NSEG 1 COIL:REGION 94->126| TM:NTM 1 TM:REGION 4->21| NREPEAT 1 REPEAT 2|81->125|127->170| SEG 6->17|slislllliais| BL:PDB:NREP 1 BL:PDB:REP 44->300|3fppB|7e-24|26.8|257/267| RP:PDB:NREP 3 RP:PDB:REP 18->92|3bg5A|1e-08|13.3|75/1137| RP:PDB:REP 102->171|3d5kA|2e-05|22.9|70/454| RP:PDB:REP 204->366|3bsdA|3e-09|8.3|157/359| RP:PFM:NREP 1 RP:PFM:REP 61->241|PF00529|6e-12|35.4|181/259|HlyD| HM:PFM:NREP 1 HM:PFM:REP 61->288|PF00529|7.7e-20|29.8|228/306|HlyD| GO:PFM:NREP 3 GO:PFM GO:0008565|"GO:protein transporter activity"|PF00529|IPR006143| GO:PFM GO:0009306|"GO:protein secretion"|PF00529|IPR006143| GO:PFM GO:0016020|"GO:membrane"|PF00529|IPR006143| RP:SCP:NREP 2 RP:SCP:REP 52->112|1qpnA2|3e-09|18.0|61/115|d.41.2.1| RP:SCP:REP 127->365|1iu4A|3e-31|8.6|232/331|d.3.1.8| HM:SCP:REP 46->294|1vf7A_|3.6e-31|31.2|221/237|f.46.1.1|1/1|HlyD-like secretion proteins| OP:NHOMO 4090 OP:NHOMOORG 651 OP:PATTERN -------------------------------------------------------------------- DEM-11------------------------------------11----------------1------------------11--44576HIIG-I22---14H6CBKAJ6D--------------65557733387342232---1-76254441-33211433342B58A3131211131211--1112222-1111111111111111-111-21211---2---111--C4----------------------------------------------111-------------------------------2---------4951B111111121211332----11-13--6289A6642332-122132A86B337112128ANEME7CGFBGA5688586787A-CGA8EECF4C9-FDDFECBHEB9C6F48822645443214444444446642695--111111----21121132-211-1-1112244235437CDDEDA87887BBAEAAAA6ABBC9DCJ-3BDA36566EB79749FC5CB9742222222A9775C-694355647B55519C8CCCC8E6475AB6B62322222222-2-------452279A886AD7C8B75ACEEC88DJCCDABEHHGE1-1B54A------7A765A68999898988-99989AA8999A8888888CEC794665443555555445435977554583-A988A99889AA--26331345988F6A48333223122221--2889884713437EEEEFEGF7DFDD8FEH22222222289BAA888889GCAABD98A887773323116155332311111111------------------------------1----1115D5 --------------------------------------------------------------------------------------------------------------1------------------------------------------------1---1-1-------------------1--5-----3---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 351 STR:RPRED 93.4 SQ:SECSTR #################ccccccccTTcTTEEEEEEEcccTTcEEcTTcEEEEEEccccEEEEEccccEEccEEcccTTcEEcTTcEEEEccTccEEEEEccGGGGGccccHHHHHHHHHHHHHHHHHHHHHHHHTTTcccHHHHcccTTcEEEEEEHEETTEEEEEEEEccccccccccccccccccccEEEEEEcccTTEEEEEEEEccTTccEEEEEEEEEEcccccccccEEEEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEEccccEEEEEEEEEEETTEEEEEEEEEEEEEEEccccHHHHHHEcTTccccccccccEEEEEEEEEEEEccccHHHHHHHHHHHccccccHEc######## DISOP:02AL 1-2,20-36,368-377| PSIPRED cccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEccEEEEEEEEEEEEEEEEEEEEEcccEEEEEEcccccEEEcccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccccEEEEEEEEccccEEcccccEEEEEEcccEEEEEEEcHHHHHHcccccEEEEEEcccccEEEEEEEEEEccccccccEEEEEEEEEccccccccccEEEEEEEccccccEEEEEHHHEEEccccEEEEEEEccEEEEEEEEEEEEEccEEEEEEccccccEEEEccHHHcccccEEEEEcccccccc //