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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO51474.1
DDBJ      :             transcriptional regulator, GntR family
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  530/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.4.5a.78.1
:232 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->214 3fmsA PDBj 2e-19 34.6 %
:RPS:PDB   9->225 3c7jA PDBj 6e-34 25.7 %
:RPS:SCOP  18->85 1e2xA1  a.4.5.6 * 2e-15 26.5 %
:RPS:SCOP  57->219 1e2xA2  a.78.1.1 * 2e-21 14.8 %
:HMM:SCOP  10->110 1v4rA1 a.4.5.6 * 5e-20 48.9 %
:RPS:PFM   20->80 PF00392 * GntR 7e-11 60.7 %
:RPS:PFM   90->213 PF07729 * FCD 5e-14 33.9 %
:HMM:PFM   90->213 PF07729 * FCD 8.2e-32 33.1 124/125  
:HMM:PFM   20->80 PF00392 * GntR 3.1e-24 54.1 61/64  
:BLT:SWISS 23->192 YDHC_BACSU 1e-20 34.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO51474.1 GT:GENE ABO51474.1 GT:PRODUCT transcriptional regulator, GntR family GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(3228496..3229194) GB:FROM 3228496 GB:TO 3229194 GB:DIRECTION - GB:PRODUCT transcriptional regulator, GntR family GB:NOTE PFAM: regulatory protein GntR, HTH; GntR domain protein KEGG: mta:Moth_1595 transcriptional regulator, GntR family GB:PROTEIN_ID ABO51474.1 GB:DB_XREF GI:134053503 InterPro:IPR000524 InterPro:IPR011711 LENGTH 232 SQ:AASEQ MNSEFGLAPIEAVPHPQIRDKVYQQLRQAILDGHIKPGERLVERKLANLLGVSRTPVREALRMLELEGLVAHLPRVGVVVAQVSDMEVLEIYRIRAVLEGLAARMAAEKIKPGQLEQLINALEQLDGFVTGDDLESLEKAHEEFNDLLYRAADSQRLYAMITTLVEHINRYAKVGYGLPGRIEEANREHRQLVEAIKLGDGSLAERLAREHIDNSRRAYFNEMAQGLPNNNK GT:EXON 1|1-232:0| BL:SWS:NREP 1 BL:SWS:REP 23->192|YDHC_BACSU|1e-20|34.9|166/224| BL:PDB:NREP 1 BL:PDB:REP 18->214|3fmsA|2e-19|34.6|188/206| RP:PDB:NREP 1 RP:PDB:REP 9->225|3c7jA|6e-34|25.7|210/232| RP:PFM:NREP 2 RP:PFM:REP 20->80|PF00392|7e-11|60.7|61/64|GntR| RP:PFM:REP 90->213|PF07729|5e-14|33.9|124/125|FCD| HM:PFM:NREP 2 HM:PFM:REP 90->213|PF07729|8.2e-32|33.1|124/125|FCD| HM:PFM:REP 20->80|PF00392|3.1e-24|54.1|61/64|GntR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00392|IPR000524| GO:PFM GO:0005622|"GO:intracellular"|PF00392|IPR000524| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00392|IPR000524| RP:SCP:NREP 2 RP:SCP:REP 18->85|1e2xA1|2e-15|26.5|68/73|a.4.5.6| RP:SCP:REP 57->219|1e2xA2|2e-21|14.8|142/149|a.78.1.1| HM:SCP:REP 10->110|1v4rA1|5e-20|48.9|88/0|a.4.5.6|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 2601 OP:NHOMOORG 543 OP:PATTERN ------2-11-11111-1--------------------------------------------1----- 1-2193135561-145322-23--5P21222454445AUO-4-7A5211426ECE333----8-85HC981---------1-B--------------------1---1-1--------------------------12243----4-----------------------1-------------3-211-1-5-22222211212221-2A18812221-22152----1-249-11111111111111-11111-1-22---------221-----111---1111-11-----------111111111--11----------28216222221111143---2112121--2422782331-1251112-1-1-13552-----22KCC--651342CCABCBC9BBF-67J56L7CIJ1-XIIHGGIOIKJII91229AI96BB969111111116221-3-4-------------------------------18--6QMCEB8A7A95555299JG875543A4RGMIG2343385657H7P2MF682----2-----------414-1723122--3112-323123211-------3-11------------------1-----124233224133333333433433342332----1--------24A4-414443422244-444453344442444444777745-128386868888668766433333231-122222221222---------1----33C5---2-1-------1-45445181--327787596A68A982EBB----------11-311111443331122222----------1-----------------------------------------------12111--- --------------------------------------------------------------------------------------------------------------------------------------------------------------2----1------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 225 STR:RPRED 97.0 SQ:SECSTR #######HccccccGGGHHHHHHHHHHHHHHTccccTTccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEETTTEEEEcccHHHHHHHHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHHHHHHcHHcccHHHHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHHHcccTTcH DISOP:02AL 1-20,223-233| PSIPRED cccccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccHHHHHHHHHHHHcccEEEEcccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccc //