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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO51519.1
DDBJ      :             Integrase, catalytic region
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  141/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1c.55.3
:519 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   5->36 1co0A PDBj 7e-05 15.6 %
:RPS:SCOP  3->42 1k78A1  a.4.1.5 * 6e-05 27.5 %
:HMM:SCOP  128->318 1c0mA2 c.55.3.2 * 1.9e-08 23.0 %
:HMM:PFM   133->263 PF00665 * rve 4.1e-15 20.9 115/120  
:HMM:PFM   5->37 PF00196 * GerE 1.7e-06 39.4 33/58  
:HMM:PFM   446->486 PF00456 * Transketolase_N 0.00054 26.8 41/333  
:BLT:SWISS 5->513 Y4BL_RHISN 1e-91 38.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO51519.1 GT:GENE ABO51519.1 GT:PRODUCT Integrase, catalytic region GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(3276374..3277933) GB:FROM 3276374 GB:TO 3277933 GB:DIRECTION - GB:PRODUCT Integrase, catalytic region GB:NOTE PFAM: Integrase, catalytic region KEGG: shw:Sputw3181_1114 integrase, catalytic region GB:PROTEIN_ID ABO51519.1 GB:DB_XREF GI:134053548 InterPro:IPR001584 LENGTH 519 SQ:AASEQ MIKYREILRLHAQGLSMRGIAASCSNSRNTVSEVLKRAESQGISWPFEKDMSDGQLQDVLFPEKNVSLTFRRRPDCEYIHKEMAKSGVTLSLLWDEYCQNCRQNHKIPYSYRQFCRFYHDYANTTKATMRIKRKPGELMEVDWAGQTMSIKDNITGEDITAYVFVAALPCSQYAYVEAFLSMETESWITAHIHAFKFFGGVTRMIVPDNLKTGVEKSSQTDPIINRTYQEMAEHYNTSIMPARVRHPKDKPSAEGTVGIISTWIIASLRNQQFFSIKELNEAIHKKLTEYNTKSFQKKPGNRLSAFTEEEKFALIPLPASPYELATWKKATVQYDYHISVDKIYYSVPYEYIKQLVDVRITKNVVEIFFKHFRIASHKRLSGKVGQASTIPEHMPDNHKKYIEFNQDSILEWASKVGSHTLTTVKSILASYKTEKQGLKSCLALMKLADKHSVERIEAACKRALDYTPRPTLKSIQTILKTGQDKLSEVNPTVDNTTKKTASSYGFTRGAAYYGGKNND GT:EXON 1|1-519:0| BL:SWS:NREP 1 BL:SWS:REP 5->513|Y4BL_RHISN|1e-91|38.2|498/516| RP:PDB:NREP 1 RP:PDB:REP 5->36|1co0A|7e-05|15.6|32/105| HM:PFM:NREP 3 HM:PFM:REP 133->263|PF00665|4.1e-15|20.9|115/120|rve| HM:PFM:REP 5->37|PF00196|1.7e-06|39.4|33/58|GerE| HM:PFM:REP 446->486|PF00456|0.00054|26.8|41/333|Transketolase_N| RP:SCP:NREP 1 RP:SCP:REP 3->42|1k78A1|6e-05|27.5|40/63|a.4.1.5| HM:SCP:REP 128->318|1c0mA2|1.9e-08|23.0|161/0|c.55.3.2|1/1|Ribonuclease H-like| OP:NHOMO 547 OP:NHOMOORG 142 OP:PATTERN --------------------------------------------------K----------------- --3115-8------------------1-11--1----71-----------------------------1-------2--------------1-6-----------1----------------------144-1---------------------------------------------------1------11-----------1---6-----------2----1--------------------------------1-------11----------7--------------------------------------------411-1--------------------4--A-1--2-2515--22--19---1--2--4-------6-31-----------------2-1-9------3---3313-I---53---------1-------------71-------------------------------------1B------1-441--B----BB5---1--1-F3---1----41--B--44-41-2A-1--------------P----3--1---2-------3B--2-43--23112--------------------------2-C2-M----2-------3-1--1---1--------1-------------------1-58------1------5--------------------------------------S---1-111-11-1----------------4----------------------1--------1----1-----91---------------------5---1----------------1------------------------------------5-------71---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 46 STR:RPRED 8.9 SQ:SECSTR ####HHHHHHHHTccccccHHHHHTccHHHHHHHHHHHHHTTcEEccccc##################################################################################################################################################################################################################################################################################################################################################################################################################################################################################### DISOP:02AL 1-1,45-45,67-69,485-499,512-520| PSIPRED ccHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHccccccccccccHHHHHHHHcccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccEEEEEEcHHHEEEEccccccEEEEEccccEEEEEEEEEEEEccccEEEEEEEEcccHHHHHHHHHHHHHHHccccEEEEEEccccEEEEcccccccccHHHHHHHHHHccEEEEccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHcccHHHcccccccccccEEEEEEEcccEEEEEccEEEEccHHHcccEEEEEEEccEEEEEEccEEEEEEEcccccccccccccccccHHHHHccccccHHHHHHHccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccccccccccccccccccccccHHHHcccccc //