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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV53999.1
DDBJ      :             DNA replication and repair protein RecF
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  542/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:420 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->351 2o5vA PDBj 3e-23 30.1 %
:RPS:PDB   5->52 1e69A PDBj 7e-05 27.1 %
:RPS:PDB   262->415 2bx2L PDBj 3e-05 8.4 %
:RPS:SCOP  5->95,269->368 1f2t.1  c.37.1.12 * 1e-08 15.4 %
:HMM:SCOP  1->381 1xew.1 c.37.1.12 * 4.5e-31 28.8 %
:RPS:PFM   28->124 PF02463 * SMC_N 2e-05 27.8 %
:HMM:PFM   5->349 PF02463 * SMC_N 8.4e-19 22.2 176/220  
:BLT:SWISS 5->350 RECF_LACGA 3e-46 34.2 %
:PROS 315->333|PS00618|RECF_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV53999.1 GT:GENE ACV53999.1 GT:PRODUCT DNA replication and repair protein RecF GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 4350..5612 GB:FROM 4350 GB:TO 5612 GB:DIRECTION + GB:PRODUCT DNA replication and repair protein RecF GB:NOTE TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: bha:BH0004 recombination protein F GB:PROTEIN_ID ACV53999.1 GB:DB_XREF GI:257473679 InterPro:IPR001238 InterPro:IPR003395 LENGTH 420 SQ:AASEQ MDLAIAHISFLNFRSYEAFDLDGIGPLTVLVGPNAAGKTNVVEGIGLLTAQSSFRHAPVDQLVRAGAPFARLTADVTDGSRQLELAVQMAEGKKKHLLNGKPKRTADLKGLVPSVTFTPDDLELAKGAMSVRRAALDALGSQLSANHYLIRRDYEKVLRHKNRLLKDEAPAALVGAMNETLVTCGAQLSCYRAALFEKLAASMASYYAEITDGHERLDAGFVPSWEEHDPLSFATRTFGRDEAREALADALARRGGEERVRKRALVGPHADRIEFFIDGKNAALFGSQGQQRSVVLAFKLAEATLIQDILRQKPVLLLDDVMSELDAARRRALVAFISGDIQTFITTTNLAYFDDDLLGGARIVELEKPRKTGEMPDEDRMFHVKHSPIDAQPARGEAEERDGQPSDPAEQPSARIEGDS GT:EXON 1|1-420:0| BL:SWS:NREP 1 BL:SWS:REP 5->350|RECF_LACGA|3e-46|34.2|339/374| PROS 315->333|PS00618|RECF_2|PDOC00539| SEG 239->257|grdearealadalarrgge| BL:PDB:NREP 1 BL:PDB:REP 2->351|2o5vA|3e-23|30.1|326/358| RP:PDB:NREP 2 RP:PDB:REP 5->52|1e69A|7e-05|27.1|48/263| RP:PDB:REP 262->415|2bx2L|3e-05|8.4|143/500| RP:PFM:NREP 1 RP:PFM:REP 28->124|PF02463|2e-05|27.8|97/536|SMC_N| HM:PFM:NREP 1 HM:PFM:REP 5->349|PF02463|8.4e-19|22.2|176/220|SMC_N| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF02463|IPR003395| GO:PFM GO:0005694|"GO:chromosome"|PF02463|IPR003395| RP:SCP:NREP 1 RP:SCP:REP 5->95,269->368|1f2t.1|1e-08|15.4|184/288|c.37.1.12| HM:SCP:REP 1->381|1xew.1|4.5e-31|28.8|278/0|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 545 OP:NHOMOORG 542 OP:PATTERN -------------------------------------------------------------------- ----111111111111112-111111111111111111111111111111111111111111111111111111111111111-----111111111--111111111111111111-11--1-11111111111111111---1111111111111------111111111-11111-11111111122-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-----1-11111111111111111111111111111111111-111-------11-1-1-----------11111111111-11-11----1-1----111111111--1-1-11111---11111111----11--------------------------------11-11-----------------------------------------------------------------------1--------------1111111111-1-11-----------------------------11--11-1-1------1------1---------1--1------111-1111111111111-1111111111111111111111--1111111111111111111111111111-111111111111---1-----1---1-------111-111-1111-----------1----1---------111---------1--------------11111111111111--11111111---1--11111-------------------------1----------11 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 393 STR:RPRED 93.6 SQ:SECSTR #cccEEEEEEEccTTccccEEEEcccEEEEEccTTTccTHHHHHHHTccccccTccccGGGGccTTcccEEEEEEEEETTEEEEEEEEEETTEEEEEETTEEEcGGGccc##cEEEEcTTTTHHHHccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHTTcGGGT#TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT##TccccEE##EEEEccccTTTHHH##############HHHHTHHHHHTHHHHHHHTTcHHHHTTEEEcccccTTcHHHHTTcHHHHHHTHHHHGTTcETccEEEcTTccEEEEEEcEEEEEEcccccHHHHHHHHHHHHHHHHHHTTccEEEEEEccccccHHHHHHHHHHTTTccccEEEEEEcTTcEEEEEEccccccHHH##### PSIPRED ccEEEEEEEEEcccEEHHEEEEccccEEEEEccccccHHHHHHHHHHHHcccccccccHHHHHHccccEEEEEEEEEEcccEEEEEEEEEcccEEEEEccEEccHHHHHHHHHHHEEccccHHHHHccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEccccHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccEEEEEcHHccccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHccccEEEEEccEEEEEEcccccEEEEccccccccccccccHHHcccccccHHcccccccccc //