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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54016.1
DDBJ      :             ribosomal protein S6
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  578/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.58.14
:97 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->95 1vmbA PDBj 5e-16 38.3 %
:RPS:PDB   1->93 1cqmA PDBj 6e-25 30.1 %
:RPS:SCOP  1->93 1cqmA  d.58.14.1 * 6e-25 30.1 %
:HMM:SCOP  1->95 1cqmA_ d.58.14.1 * 5.9e-27 42.1 %
:RPS:PFM   4->92 PF01250 * Ribosomal_S6 1e-17 41.6 %
:HMM:PFM   3->92 PF01250 * Ribosomal_S6 1e-32 42.2 90/92  
:BLT:SWISS 1->92 RS6_CLOPS 9e-24 54.3 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54016.1 GT:GENE ACV54016.1 GT:PRODUCT ribosomal protein S6 GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 31390..31683 GB:FROM 31390 GB:TO 31683 GB:DIRECTION + GB:PRODUCT ribosomal protein S6 GB:NOTE TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; KEGG: bsu:BSU40910 30S ribosomal protein S6 GB:PROTEIN_ID ACV54016.1 GB:DB_XREF GI:257473696 InterPro:IPR000529 LENGTH 97 SQ:AASEQ MKAYELLFFVAPSIDEETRAAVMKRIDTTIAEGKGTVDNVDNWGKRKLAYEINGLTDGDYTLIDFHADPADVAELDRVLRITDAVERHMIVKRTDRD GT:EXON 1|1-97:0| BL:SWS:NREP 1 BL:SWS:REP 1->92|RS6_CLOPS|9e-24|54.3|92/95| BL:PDB:NREP 1 BL:PDB:REP 2->95|1vmbA|5e-16|38.3|94/107| RP:PDB:NREP 1 RP:PDB:REP 1->93|1cqmA|6e-25|30.1|93/98| RP:PFM:NREP 1 RP:PFM:REP 4->92|PF01250|1e-17|41.6|89/92|Ribosomal_S6| HM:PFM:NREP 1 HM:PFM:REP 3->92|PF01250|1e-32|42.2|90/92|Ribosomal_S6| GO:PFM:NREP 4 GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF01250|IPR000529| GO:PFM GO:0005840|"GO:ribosome"|PF01250|IPR000529| GO:PFM GO:0006412|"GO:translation"|PF01250|IPR000529| GO:PFM GO:0019843|"GO:rRNA binding"|PF01250|IPR000529| RP:SCP:NREP 1 RP:SCP:REP 1->93|1cqmA|6e-25|30.1|93/98|d.58.14.1| HM:SCP:REP 1->95|1cqmA_|5.9e-27|42.1|95/0|d.58.14.1|1/1|Ribosomal protein S6| OP:NHOMO 580 OP:NHOMOORG 580 OP:PATTERN -------------------------------------------------------------------- 1111111----11-11111-11111111111111111111111111111111111111--11111111111111111111111---11-----1-------------------------------11--1-11--------111-1-11---1---1-------1--------------------------111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111-1111-11111111111111111-11-1-----------------------------------11-11-1-------------------1-1-------------------------------------------------------------111111111111111111111111111111111111111-11111111111111-11-11111111111111111-1-111111--1-11-11-1------111111-111111-----------11---1-111111-111111111-111111--1-11-111111-----1111111111111-111-1111111111111111111---111111111111111111111111111111-111111111111-11111111-----111111111111111111111-111-1111111111111111111111---------11111111111111111111111111111--------------------1-------------------------1111111111--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 95 STR:RPRED 97.9 SQ:SECSTR cEEEEEEEEEcTTccHHHHHHHHHHHHHHHHHTTcEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEcHHHHHHHHHHHHTcTTEEEEEEEEcHH## PSIPRED cccEEEEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEEccccccccHHEcccccEEEEEEEEEEccHHHHHHHHHHHcccHHHHHHEEEEccccc //