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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54038.1
DDBJ      :             type II secretion system protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  426/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:402 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   65->168 2vmbB PDBj 2e-12 32.7 %
:RPS:PDB   58->168 3c1qA PDBj 4e-13 32.4 %
:RPS:PFM   74->173 PF00482 * GSPII_F 3e-11 31.0 %
:HMM:PFM   70->192 PF00482 * GSPII_F 7.8e-29 26.8 123/124  
:HMM:PFM   272->394 PF00482 * GSPII_F 5.1e-26 28.5 123/124  
:HMM:PFM   247->294 PF07451 * SpoVAD 0.00015 38.3 47/329  
:HMM:PFM   31->81 PF06776 * IalB 0.00016 21.6 51/134  
:BLT:SWISS 1->398 GSPF_VIBCH 7e-33 31.2 %
:PROS 164->192|PS00874|T2SP_F
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54038.1 GT:GENE ACV54038.1 GT:PRODUCT type II secretion system protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 58422..59630 GB:FROM 58422 GB:TO 59630 GB:DIRECTION + GB:PRODUCT type II secretion system protein GB:NOTE PFAM: type II secretion system protein; KEGG: dal:Dalk_1782 type II secretion system protein GB:PROTEIN_ID ACV54038.1 GB:DB_XREF GI:257473718 InterPro:IPR001992 InterPro:IPR003004 LENGTH 402 SQ:AASEQ MPTFTYTGITAAGQQIDGVVEAFDEIEAMERAREQCRVVQSVVPVREGKNLLSMDITKPKAKQKNLAVMCAQFATILNAGVPAARATSLVADQVTDKYLKRVLADVAADVASGHSLAESFQSKGENLPRVFIETVRAGEESGHLPESFQRLHGYFDKRAKVSAKVQSAVTYPIFVAVIAVVVLAIMMVMVIPSMTGMIASLGADTPAMTQFLIDASNFVTDNFLLIAVVLALIVVGVKLFGTTERGKTTFAVLKLRLPVLGAVGVCSGAAQFANTMAMLVTAGLPATRAVAITSRVMSNYVLSREVGRLEAGLEEGRTLGEGLEASTYLPRTLVEMVTVGEHTGELEETLETMGAFYDDETQRVTNKAISIMEPALLVLMALFAGFIVIALYLPMFSLYAAM GT:EXON 1|1-402:0| BL:SWS:NREP 1 BL:SWS:REP 1->398|GSPF_VIBCH|7e-33|31.2|398/406| PROS 164->192|PS00874|T2SP_F|PDOC00682| TM:NTM 4 TM:REGION 175->197| TM:REGION 217->239| TM:REGION 248->270| TM:REGION 372->394| SEG 175->191|vaviavvvlaimmvmvi| SEG 224->235|lliavvlalivv| SEG 307->325|grleagleegrtlgeglea| SEG 337->352|vtvgehtgeleetlet| BL:PDB:NREP 1 BL:PDB:REP 65->168|2vmbB|2e-12|32.7|104/115| RP:PDB:NREP 1 RP:PDB:REP 58->168|3c1qA|4e-13|32.4|108/111| RP:PFM:NREP 1 RP:PFM:REP 74->173|PF00482|3e-11|31.0|100/124|GSPII_F| HM:PFM:NREP 4 HM:PFM:REP 70->192|PF00482|7.8e-29|26.8|123/124|GSPII_F| HM:PFM:REP 272->394|PF00482|5.1e-26|28.5|123/124|GSPII_F| HM:PFM:REP 247->294|PF07451|0.00015|38.3|47/329|SpoVAD| HM:PFM:REP 31->81|PF06776|0.00016|21.6|51/134|IalB| OP:NHOMO 744 OP:NHOMOORG 428 OP:PATTERN -------------------------------------------------------------------- 122-------------------------------------1---1---1----1--------1-----------------1-121211--------------1------1---------1----1----------------111--111111111111--11111211111-1--1-11--1-1112122111-------------------------111--11-------1--------------------------------------------------------------------------------1---------11112111111-21112221121--1---1223113221221111111--2221111-------1------1-----------------1-2--------------------1112----------------------1--1-----------------------------1-111-11--11111121111111111111112212222--2223232222232221332322111111113223242333121--12111-33333335322222232-1111---------------1132111322334323323333333333333333343--12223------2-21--12221222213-222211222222232233111111--------------------1211111--312222222222---2-----22222231--------1111----232221212-132343323422122223211111111122333333333333333333332222222--1-111111------------------------------------11-1111111-31 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 117 STR:RPRED 29.1 SQ:SECSTR #########################################################cccccHHHHHHHHHHHHHHHHTTccHHHHHHHHHHTccccHHHHHHHHHHHHHHTTccHHHHHTTcTTTTccHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHTTcHHHHHc#################################################################################################################################################################################################################################### PSIPRED cccEEEEEEcccccEEEEEEEcccHHHHHHHHHHcccEEEEEEEHHHcccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //