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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54047.1
DDBJ      :             transcriptional regulator, TetR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  38/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:212 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   13->76 2of7A PDBj 1e-10 47.6 %
:RPS:PDB   15->78 2dt5A PDBj 1e-12 7.8 %
:RPS:SCOP  15->90 1rktA1  a.4.1.9 * 3e-12 21.6 %
:HMM:SCOP  15->88 2fd5A1 a.4.1.9 * 1.3e-12 33.8 %
:RPS:PFM   29->67 PF00440 * TetR_N 1e-05 46.2 %
:HMM:PFM   28->67 PF00440 * TetR_N 9.1e-15 35.0 40/47  
:BLT:SWISS 13->134 TCMR_STRGA 4e-10 37.5 %
:PROS 38->69|PS01081|HTH_TETR_1

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54047.1 GT:GENE ACV54047.1 GT:PRODUCT transcriptional regulator, TetR family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 67427..68065 GB:FROM 67427 GB:TO 68065 GB:DIRECTION + GB:PRODUCT transcriptional regulator, TetR family GB:NOTE PFAM: regulatory protein TetR; KEGG: transcriptional regulator protein GB:PROTEIN_ID ACV54047.1 GB:DB_XREF GI:257473727 InterPro:IPR001647 LENGTH 212 SQ:AASEQ MEQRQADGGQSMGLRERKRRATRDAIERAAIALVSERGYDNVTVAQICEASSVSQGTFFNYFRTKDAAIVGIGEYDLDADSVRAAFDRLMPCSMLHATLTLFLEVAGSFDWESDIAAQRIALVSETPSLMQLFLDNAFGFVSDFRNIVEAYFEANPSLRTCSDVLSSAEESYIVVSEALEAAKFALYRVADDPASGLPSADEVEAVIRRIVG GT:EXON 1|1-212:0| BL:SWS:NREP 1 BL:SWS:REP 13->134|TCMR_STRGA|4e-10|37.5|120/226| PROS 38->69|PS01081|HTH_TETR_1|PDOC00830| BL:PDB:NREP 1 BL:PDB:REP 13->76|2of7A|1e-10|47.6|63/185| RP:PDB:NREP 1 RP:PDB:REP 15->78|2dt5A|1e-12|7.8|64/210| RP:PFM:NREP 1 RP:PFM:REP 29->67|PF00440|1e-05|46.2|39/47|TetR_N| HM:PFM:NREP 1 HM:PFM:REP 28->67|PF00440|9.1e-15|35.0|40/47|TetR_N| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 1 RP:SCP:REP 15->90|1rktA1|3e-12|21.6|74/81|a.4.1.9| HM:SCP:REP 15->88|2fd5A1|1.3e-12|33.8|74/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 53 OP:NHOMOORG 38 OP:PATTERN -------------------------------------------------------------------- ----2111112-11-32----3---1-------222-1---1-1-111---1-1-1-2------1112131---------2---------------------------------------------------------------------------------------------------------------------------------1---------------------1--------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 203 STR:RPRED 95.8 SQ:SECSTR #########HcccccccHHHHHHHHHHHHHHHHHHHTTccEEcHHHHHHHHTccHHHHHHHHHHTTccccTTTcEEHHHHHHHHHHHTccTTccHHHHHHHHHHHTTTTTTccTTHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcTTcccHHHHHHHHHHHHHHHHH PSIPRED cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcc //