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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54118.1
DDBJ      :             Succinate dehydrogenase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  157/915 : Eukaryota  26/199 : Viruses  0/175   --->[See Alignment]
b.52.1c.3.1
:497 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   67->494 1ksuA PDBj 1e-36 33.7 %
:RPS:PDB   46->496 1d4cB PDBj 2e-36 27.6 %
:RPS:SCOP  46->324 1d4cA2  c.3.1.4 * 3e-17 22.6 %
:RPS:SCOP  312->494 2pnwA1  b.52.1.4 * 5e-10 11.8 %
:HMM:SCOP  26->497 1jnrA2 c.3.1.4 * 5.1e-36 28.4 %
:RPS:PFM   48->467 PF00890 * FAD_binding_2 6e-15 31.0 %
:HMM:PFM   48->470 PF00890 * FAD_binding_2 7.5e-52 32.8 354/421  
:HMM:PFM   5->29 PF10518 * TAT_signal 2.4e-05 44.0 25/26  
:BLT:SWISS 67->496 FRDA_SHEFR 3e-36 33.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54118.1 GT:GENE ACV54118.1 GT:PRODUCT Succinate dehydrogenase GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 166763..168256 GB:FROM 166763 GB:TO 168256 GB:DIRECTION + GB:PRODUCT Succinate dehydrogenase GB:NOTE PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: spl:Spea_0722 flavocytochrome c GB:PROTEIN_ID ACV54118.1 GB:DB_XREF GI:257473798 InterPro:IPR003953 InterPro:IPR006076 InterPro:IPR006311 LENGTH 497 SQ:AASEQ MNEGISRRNFIGGAALGGAALALGALAGCAPQGDKPTGSEGTWDAEVDLLVCGCGGAGMACAVEAKDNGVENVLIIEKGDQIGGTTAMSQGMIAGWDTQLQKSQGVELTYDAMYANLMNNASYHLDPALTKITVENSGKTIDWLIDRVGVKFTDQIDIYYGPLQMMHNVDGAGGGFVAAFTACLDQLGVEIQKGTKLVEVLLDAEGKTEGAVVEAKGKTQRIKARAIMIATGGYAYNAELAARFDPEKAGTFGIGHPNCEGEGLVAASNAGALLSHTNDMMCVVKDYTIMSEHNGTSASANLNGFTNLPNMILVGADGKRFVDEGKKGFMSQNLNGPIFDKIHRDGMGYVWEISDEATVAAAGGKVKRGEGLEYIKGADATELAANMGVDAAALAETIEAYNAAVDSGVDREIGGFPTAKLEAPFLAVPVVPCEIITYGGVARTEQGEVIRADGEVMPGLFVGGEASCNSAYMGFTLSNCFTWGRIGAQSAAAYLKA GT:EXON 1|1-497:0| BL:SWS:NREP 1 BL:SWS:REP 67->496|FRDA_SHEFR|3e-36|33.8|411/571| SEG 12->28|ggaalggaalalgalag| SEG 52->62|cgcggagmaca| SEG 171->182|gagggfvaafta| BL:PDB:NREP 1 BL:PDB:REP 67->494|1ksuA|1e-36|33.7|409/568| RP:PDB:NREP 1 RP:PDB:REP 46->496|1d4cB|2e-36|27.6|434/566| RP:PFM:NREP 1 RP:PFM:REP 48->467|PF00890|6e-15|31.0|352/375|FAD_binding_2| HM:PFM:NREP 2 HM:PFM:REP 48->470|PF00890|7.5e-52|32.8|354/421|FAD_binding_2| HM:PFM:REP 5->29|PF10518|2.4e-05|44.0|25/26|TAT_signal| GO:PFM:NREP 2 GO:PFM GO:0009055|"GO:electron carrier activity"|PF00890|IPR003953| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00890|IPR003953| RP:SCP:NREP 2 RP:SCP:REP 46->324|1d4cA2|3e-17|22.6|274/322|c.3.1.4| RP:SCP:REP 312->494|2pnwA1|5e-10|11.8|178/354|b.52.1.4| HM:SCP:REP 26->497|1jnrA2|5.1e-36|28.4|313/357|c.3.1.4|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 397 OP:NHOMOORG 184 OP:PATTERN ------------------------------1------------------------------------- --------113---44311-14--141-111132123743-2-3----------1-----3-6----------------6N51----------------------------------------------------------------------------------------------------1-----------------------------------------111111------------------11---2-311213123311-1-11-1-111--------22--------------------------1---1112-96-2------------------24-2------CB-----1-------1----------------12----1-----------------1--2--2-1-1-----------1-1--111---1--1-----------------------------------------------13--3431-----1-1-------4--------2-11------3---------------------------------1---1----------115-----21-2---1--4--------------------------1--------21231-5532232452563---------------32-11-----------------------------122221------------------------------------------------------------------------------------2-11-1-1---1122-----------------------1----------------------------------------------------------------------------- ------1-1----11-------1-1--------1-1--------11----------------------------------1-----1--262-111-----2-112---------------------------------------------------------1-------11-------------------1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 455 STR:RPRED 91.5 SQ:SECSTR ##########################################ccEEccEEEEcccHHHHHHHHHHHHHTcccEEEEcccccccTTGGGccccEEccccHHHHHTTccccHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHHHHHTTccccEEEccTTcccccEEEccccccHHHHHHHHHHHHTTcEEEccEEEEEEEEcccccEEEEEEETTTEEEEEEccEEEEcccccTTcHHHHHHHcGGGTTcEEcccTTcccHHHHHHHTTTccEEcEEEcTTcEEEEEEEcTTTcccccTHHHHHHHHTTcEEEcccccccccTTccHHHHHHHHHHHHHHHHTcTTccEEEEEEHHHHHHcTHHHHHHHTTccEEEccHHHHHHHHTccHHHHHHHHHHHHHHHHHTccccccccccccccccEEEEEEEEEEEEEccEEEccTTcEEEcTTccEEEEEEEccTTEETcccTTHHHHHHHHHHHHHHHHHHHHHTH DISOP:02AL 497-498| PSIPRED ccccccHHHHHHHHHHHHHHHHHcHHHcccccccccccccccccccccEEEEcccHHHHHHHHHHHHccccEEEEEEcccccccccHHccccccccccHHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEccEEEEEEEccccEEEEEEEEcccEEEEEEEccEEEccccccccHHHHHHHccccccccccccccccHHHHHHHHHccccEEccccccEEEccccccccccccccccccccccccccEEEEcccccEEccccccccHHHHHHHHHHHHHHHccccEEEEEccHHHHHHccccccccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEEEEEEEcccccccccccEEcccccccccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHcc //