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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54175.1
DDBJ      :             transcriptional regulator, LuxR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  5/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.6
:600 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   543->600 1fseE PDBj 1e-05 39.7 %
:RPS:PDB   425->481 3cloA PDBj 1e-11 26.3 %
:RPS:PDB   530->599 3cloA PDBj 2e-16 21.7 %
:RPS:SCOP  425->487 1fseA  a.4.6.2 * 2e-10 22.2 %
:RPS:SCOP  543->599 1h0mA1  a.4.6.2 * 4e-14 28.1 %
:HMM:SCOP  403->489 1p4wA_ a.4.6.2 * 2.9e-13 31.0 %
:HMM:SCOP  521->599 1p4wA_ a.4.6.2 * 5.2e-15 35.4 %
:RPS:PFM   425->478 PF00196 * GerE 8e-04 35.2 %
:RPS:PFM   543->594 PF00196 * GerE 4e-08 44.2 %
:HMM:PFM   425->478 PF00196 * GerE 1.9e-10 35.2 54/58  
:HMM:PFM   542->596 PF00196 * GerE 1.3e-20 43.6 55/58  
:BLT:SWISS 425->484 TRPO_PSEAE 9e-05 38.3 %
:BLT:SWISS 521->598 TRPO_PSEAE 1e-08 37.2 %
:PROS 557->584|PS00622|HTH_LUXR_1
:TM
:REPEAT 2|404->481|522->599
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54175.1 GT:GENE ACV54175.1 GT:PRODUCT transcriptional regulator, LuxR family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(249371..251173) GB:FROM 249371 GB:TO 251173 GB:DIRECTION - GB:PRODUCT transcriptional regulator, LuxR family GB:NOTE PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: bbr:BB2740 response regulatory protein GB:PROTEIN_ID ACV54175.1 GB:DB_XREF GI:257473855 InterPro:IPR000792 InterPro:IPR013249 LENGTH 600 SQ:AASEQ MATRAACYAGYAFLLLANILSYHATTAFASVPSFDDGTYMPVLGATHAAAFVAVALRYRNVAHEPLGSKAAGFAAVALCIGFALVLGSCSVGMQPGFVAGTVLIGVGQAVLSLLWLSALPMFSYRTSYLFLLGSHAAATALCAIVLQCPQEWYIPITLASLLAACACATRLRVARPIERTFSSQIADVAPLVGKGVLAVGLFALLSGFVTSLSGQPDIDPDLMQYLVLGISACVLVIMSVPALLFRQPFKLESSYRVALPLSALGLLVLPGLTEAVPPAIAGTLATTGYMMCGIVLACTIAEVGKAARIPVMPLFAASDTVSLLCLLAGTEAGALTRVYLPGTNAGFALIGLGTLYLVMLGASWLLGRERIPRRSDPQPSPPPEQDARPSGGAASEPADATRLASAPIQIVAAPEPDLVAAAYGLSDLETTVFKQLLEGRTIARIAQDLYLSPSAVKYHTQKIYRAFDVHTRAELAAFMRQPRLADVAPARSTDALSPESRAFTPETEAFGRQCAVGDDQPASAPLAVTRANPCERLALQHGLTDRERQTLELLALGETVAAIARALDVSENTVKTYTKRVYRKLDVHSKQDIIDLCREG GT:EXON 1|1-600:0| BL:SWS:NREP 2 BL:SWS:REP 425->484|TRPO_PSEAE|9e-05|38.3|60/207| BL:SWS:REP 521->598|TRPO_PSEAE|1e-08|37.2|78/207| PROS 557->584|PS00622|HTH_LUXR_1|PDOC00542| TM:NTM 11 TM:REGION 3->25| TM:REGION 69->91| TM:REGION 99->121| TM:REGION 129->149| TM:REGION 151->170| TM:REGION 187->209| TM:REGION 224->246| TM:REGION 252->274| TM:REGION 279->301| TM:REGION 313->335| TM:REGION 345->367| NREPEAT 1 REPEAT 2|404->481|522->599| SEG 42->55|vlgathaaafvava| SEG 157->175|tlasllaacacatrlrvar| SEG 257->272|valplsalgllvlpgl| SEG 372->390|prrsdpqpspppeqdarps| BL:PDB:NREP 1 BL:PDB:REP 543->600|1fseE|1e-05|39.7|58/64| RP:PDB:NREP 2 RP:PDB:REP 425->481|3cloA|1e-11|26.3|57/249| RP:PDB:REP 530->599|3cloA|2e-16|21.7|69/249| RP:PFM:NREP 2 RP:PFM:REP 425->478|PF00196|8e-04|35.2|54/57|GerE| RP:PFM:REP 543->594|PF00196|4e-08|44.2|52/57|GerE| HM:PFM:NREP 2 HM:PFM:REP 425->478|PF00196|1.9e-10|35.2|54/58|GerE| HM:PFM:REP 542->596|PF00196|1.3e-20|43.6|55/58|GerE| GO:PFM:NREP 8 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 2 RP:SCP:REP 425->487|1fseA|2e-10|22.2|63/67|a.4.6.2| RP:SCP:REP 543->599|1h0mA1|4e-14|28.1|57/65|a.4.6.2| HM:SCP:REP 403->489|1p4wA_|2.9e-13|31.0|87/0|a.4.6.2|1/2|C-terminal effector domain of the bipartite response regulators| HM:SCP:REP 521->599|1p4wA_|5.2e-15|35.4|79/0|a.4.6.2|2/2|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 52 OP:NHOMOORG 5 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------4d7-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 162 STR:RPRED 27.0 SQ:SECSTR ##################################################################################################################################################################################################################################################################################################################################################################################################################################HHHHHcccHHHHHHHHHHHcTcEEHHHHHHcccccccHHHHHHHHHHHTEEEccHHHHHHHHHHTTc####################HHHHHHHHGGGccHHHHHHHHHHHEEcccHHHHTTccccHHHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHHHHHHHTTcccHHHHHHHHHHT DISOP:02AL 53-53,59-59,188-188,193-194,199-200,202-202,207-207,263-263,277-277,283-283,286-286,291-291,305-326| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHEccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEcHHHHHHHHHccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccHHHHHHHHHccccccHHHHHccccccHHHHcccccEEEEcccccHHHcHHHHHHccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccEEccccccHHHHHHHHHHHHHccccccccHHHHHHHccccccccccccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHcc //