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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54230.1
DDBJ      :             polar amino acid ABC transporter, inner membrane subunit
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  700/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:450 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   305->347 3dhwA PDBj 2e-07 25.6 %
:RPS:SCOP  163->406 2r6gG1  f.58.1.1 * 1e-23 12.4 %
:RPS:PFM   63->138 PF10989 * DUF2808 6e-06 35.5 %
:RPS:PFM   224->346 PF00528 * BPD_transp_1 3e-08 34.7 %
:HMM:PFM   226->405 PF00528 * BPD_transp_1 3.9e-18 20.3 177/185  
:HMM:PFM   55->141 PF10989 * DUF2808 2.4e-05 24.4 86/146  
:BLT:SWISS 102->178 SUCC_FRASN 3e-04 27.3 %
:BLT:SWISS 198->405 GLNM_BACSU 4e-34 33.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54230.1 GT:GENE ACV54230.1 GT:PRODUCT polar amino acid ABC transporter, inner membrane subunit GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 326240..327592 GB:FROM 326240 GB:TO 327592 GB:DIRECTION + GB:PRODUCT polar amino acid ABC transporter, inner membrane subunit GB:NOTE TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5538 polar amino acid ABC transporter, inner membrane subunit GB:PROTEIN_ID ACV54230.1 GB:DB_XREF GI:257473910 InterPro:IPR000515 InterPro:IPR010065 LENGTH 450 SQ:AASEQ MHLASAAALLAAAALAVLFAFPLSAQAMEVERWTAQPNDDALEKVMGATPTRVTWQGQTAEDESLSALAIDLPEGSSVDAENVKVTVMNGLDRLDVASKVQVDGGSLVTVTFPEATPAGSLVMVECNRTLLPGDGGTFGLTGSYTTADGQTLDMPATDKTFDVVSTSPAEQLSTWLGMQDWVKAWNSNKFLHLFFDPSIIVTSVPVVFSGWLIAIALVIVSFPLAIPIGLLWSFMRMAKSRVPRALGATYINIVRGTPLFLQIYIAFFGLPLLGIKMDLFVLGAIVLVLNSSAYLAEIFRAGIQSINGGQFEAARSLGMNGAQTMFYVIIPQTVRRVIPTMTSEFILMYKDTSLLAAVGVMEIMMYAKTITAATGNVTPYIVAAGFYLIVTIPMTKLINSMEQRMAGGRKKRKKGVTITSEEAVLPDSDAAVSKSLRMSETLAGSNHISH GT:EXON 1|1-450:0| BL:SWS:NREP 2 BL:SWS:REP 102->178|SUCC_FRASN|3e-04|27.3|77/388| BL:SWS:REP 198->405|GLNM_BACSU|4e-34|33.2|208/216| TM:NTM 7 TM:REGION 5->27| TM:REGION 188->210| TM:REGION 215->237| TM:REGION 273->295| TM:REGION 313->334| TM:REGION 351->373| TM:REGION 378->400| SEG 3->25|lasaaallaaaalavlfafplsa| SEG 407->415|ggrkkrkkg| RP:PDB:NREP 1 RP:PDB:REP 305->347|3dhwA|2e-07|25.6|39/203| RP:PFM:NREP 2 RP:PFM:REP 63->138|PF10989|6e-06|35.5|76/143|DUF2808| RP:PFM:REP 224->346|PF00528|3e-08|34.7|118/195|BPD_transp_1| HM:PFM:NREP 2 HM:PFM:REP 226->405|PF00528|3.9e-18|20.3|177/185|BPD_transp_1| HM:PFM:REP 55->141|PF10989|2.4e-05|24.4|86/146|DUF2808| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 163->406|2r6gG1|1e-23|12.4|242/284|f.58.1.1| OP:NHOMO 4652 OP:NHOMOORG 734 OP:PATTERN 11--12----------1-1111114--21-2211----1122--2222--1-1----2------2--- ----4313333321411----6--1C------766636C914225282433-769135--2221577B5A4655575531421---------------------------11111111111111-----1--4---222441111-2234223332211211--1--3322-2222--2222-1341111--27455555875566556623398556333854355555396222222222222222222246656AB785576666B93757C533388886664AA999888999986666566666666798BA98888135575645455232344423333122142331AA-4132-1111111171--11137444422M68222422222375347567R-22G22E29EK23rUUPUXUWVhMNOA---36L878A45C1111111134511-4A----------111111111111111--1-5--21-6IGCHNMMLOKC9CCDFFJUEDEEADHGb779412A8C94854B9HGNQ244----A44422222---25-11L-897C56CAAA42-23-3-------1--5-3441666663342222322-13----98C-3-----C-1111--11111111-11-3---1--------BBMM8CCAAAAAA8AA9-AACAAAAAAAAAA9AA99BIOFMM776A8A7AAAAAAAAAA8AG99899993-FCCCCCBBCCCC--5-222221111--7AF55553533323333266666-64554-GEDGIQKTBGIDF5MKL----------777A99999AA97711---------------2----------------3628----------------------132-115111--1 --------------------------------------------------------------------------------------------------------------------------------------------------------------2----2------6-----------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 39 STR:RPRED 8.7 SQ:SECSTR ################################################################################################################################################################################################################################################################################################################HccTTTTTHHHHHTccTHHHHHHTTHHH####HHHHHHHHHHH####################################################################################################### DISOP:02AL 39-39,73-74,76-76,81-81,123-123,137-137,160-160| PSIPRED ccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccHHHHHHHHcccccEEEEcccccccccccEEEEEcccccccccccEEEEEEccccccccHHEEEEccccEEEEEcccccccccEEEEEccccccccccccEEEEEcEEcccccEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHccccccccccccccHHHHHHccccccc //