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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54295.1
DDBJ      :             transcriptional regulator, AraC family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  9/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:336 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   232->336 1bl0A PDBj 9e-08 16.2 %
:RPS:SCOP  232->284 1bl0A1  a.4.1.8 * 7e-08 20.8 %
:HMM:SCOP  232->285 1d5yA1 a.4.1.8 * 8.3e-10 33.3 %
:HMM:SCOP  286->336 1d5yA2 a.4.1.8 * 5.8e-07 29.4 %
:HMM:PFM   255->284 PF00165 * HTH_AraC 3e-05 26.7 30/42  
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54295.1 GT:GENE ACV54295.1 GT:PRODUCT transcriptional regulator, AraC family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(399426..400436) GB:FROM 399426 GB:TO 400436 GB:DIRECTION - GB:PRODUCT transcriptional regulator, AraC family GB:NOTE PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: csa:Csal_2914 transcriptional regulator, AraC family GB:PROTEIN_ID ACV54295.1 GB:DB_XREF GI:257473975 InterPro:IPR000005 LENGTH 336 SQ:AASEQ MIRADGNRDGTAAACADYDIMREVFLPCLADMQMEETCAADVGAPEREGRMFRMPRDVASGYFWLYAERDFAISATDMLFPRDFREQCRHPRFVSVRYYLSGSCVESVTNRTVEAPYLEGHVLDTPHWDCLCRAGTPIRNVEIMLAPPFYEQYLREVYRDEAFSAEEAFASIDGLSDFPEMVVLLKQVEAYRGRGASARLFYRSKVEEAVALVVDKSRAMAGERASELASEDMHAIERVRRRLEQQLAAPVDADELARIACMGQTKLRRTFKQACGCTIVEYRQRLRCAKAAELLAAGDAPVAQVAAAVGYRPERLAELFARTHHTTPSAYRAAMR GT:EXON 1|1-336:0| SEG 161->171|eafsaeeafas| SEG 286->309|lrcakaaellaagdapvaqvaaav| RP:PDB:NREP 1 RP:PDB:REP 232->336|1bl0A|9e-08|16.2|105/116| HM:PFM:NREP 1 HM:PFM:REP 255->284|PF00165|3e-05|26.7|30/42|HTH_AraC| RP:SCP:NREP 1 RP:SCP:REP 232->284|1bl0A1|7e-08|20.8|53/54|a.4.1.8| HM:SCP:REP 232->285|1d5yA1|8.3e-10|33.3|54/54|a.4.1.8|1/2|Homeodomain-like| HM:SCP:REP 286->336|1d5yA2|5.8e-07|29.4|51/0|a.4.1.8|2/2|Homeodomain-like| OP:NHOMO 12 OP:NHOMOORG 9 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------4------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111--1----------------------11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 118 STR:RPRED 35.1 SQ:SECSTR ##########################################################################################################################################################################################################################cHHHHHHTTccHHcHHHHHHHHHHHHTTTTcccccHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHTTccHHHHHHHHHHHHcccHHHHHTccc PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEcHHHHHHHHHHHccccEEEEEEEEEEcccEEEEccccccEEEEEEEEEEEEEcccEEEEcccccEEEEcccccEEEEEccccEEEEEEEEEcHHHHHHHHHHHccccccccHHHHcccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHcc //