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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54392.1
DDBJ      :             NLPA lipoprotein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  538/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:291 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   54->291 3gxaC PDBj 1e-45 39.3 %
:RPS:PDB   48->283 1b1xA PDBj 2e-15 8.1 %
:RPS:SCOP  51->288 1p99A  c.94.1.1 * 1e-51 27.6 %
:HMM:SCOP  50->278 1p99A_ c.94.1.1 * 7.6e-62 42.0 %
:RPS:PFM   51->276 PF03180 * Lipoprotein_9 1e-41 41.5 %
:HMM:PFM   51->277 PF03180 * Lipoprotein_9 4.3e-75 41.8 225/237  
:BLT:SWISS 37->284 METQ_YERPE 1e-28 36.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54392.1 GT:GENE ACV54392.1 GT:PRODUCT NLPA lipoprotein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(515808..516683) GB:FROM 515808 GB:TO 516683 GB:DIRECTION - GB:PRODUCT NLPA lipoprotein GB:NOTE PFAM: NLPA lipoprotein; KEGG: cko:CKO_02640 hypothetical protein GB:PROTEIN_ID ACV54392.1 GB:DB_XREF GI:257474072 InterPro:IPR004872 LENGTH 291 SQ:AASEQ MTIRTASHETPAGSRSSRARRAAAALVACLAVALLILPGCTSTGGSNAETIRVGVCAGPYQDMFEQAIEPSLTEQGYSVKYVEFSDYVQPNNALADGEIDLNLFQHATYLESFSKQHNLDLASIVEVPTAAMGVFLGKAGSLDQLPPNATVAIPNDDTNLSRALRVLQQAGLITLDASVDPAKAGVNNIAENPRGLSFQQVNAEVLPTVLDSVDVAVINGNYAIGAGLDLADAAYVEQLSEGYYNVIAVQGADADAEFAQAVKGIVQSDAFKSVIDDPDNIFAGFGKPSSY GT:EXON 1|1-291:0| BL:SWS:NREP 1 BL:SWS:REP 37->284|METQ_YERPE|1e-28|36.2|243/271| TM:NTM 1 TM:REGION 22->44| SEG 14->35|srssrarraaaalvaclavall| SEG 222->235|yaigagldladaay| BL:PDB:NREP 1 BL:PDB:REP 54->291|3gxaC|1e-45|39.3|234/244| RP:PDB:NREP 1 RP:PDB:REP 48->283|1b1xA|2e-15|8.1|235/689| RP:PFM:NREP 1 RP:PFM:REP 51->276|PF03180|1e-41|41.5|224/236|Lipoprotein_9| HM:PFM:NREP 1 HM:PFM:REP 51->277|PF03180|4.3e-75|41.8|225/237|Lipoprotein_9| RP:SCP:NREP 1 RP:SCP:REP 51->288|1p99A|1e-51|27.6|232/257|c.94.1.1| HM:SCP:REP 50->278|1p99A_|7.6e-62|42.0|226/255|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 1060 OP:NHOMOORG 541 OP:PATTERN -------------------------------------------------------------------- -----2211111111----------2------1-1-112-----121211111-1111-----111121111222111-122-------------------1---------------11111111----------------------------------------------------------1-2------12444444442444444313312344112244322222223322222222222222422223212232311132334412122144433341111111111111111111111111111111-12221111-2112333333313--2221---111211----11-1-11-1-11-1-11---111-111-11-125---322-222222222213---2--2-2-1--21121111111132-----11411---11111111-11---13-----------------------------------343435455552444255434444235484245--222--2228-113--------111111111--------------1-------------------1----2211444441121111111-1-----221-1-----1--------------------------------43431422222222222-2222222222222222221676441142222222222222222422211121-322222222222--1-111111111---1-22211111111211144444321111-33333543234341333111111111-1111111111211111111111111111---4---------------11---------------------------1---------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------4-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 247 STR:RPRED 84.9 SQ:SECSTR ############################################ccccccEEEEEccHHHHHHHHHHHHHHHHTTcccEEEEEcccHHHHHHHHHTTccccEEEcHHHHHHHHcTTTcEEEEEEEEcccccEEEEEEEETTccccGTTcEEEEccTTcTTTTHHHHcHHHHccccTTHccHHHHHHHHccEEEcTTccTTTcGGGTTTccccTTTTTcccTTcTTcHHHHHHHHHHTTcccEEEEccHHHHHcccHHHHTTEEEEETTTEEEEGGGTTTcccETccccGGG PSIPRED ccEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEcccHHHHHHHHHHHHHHHcccEEEEEEEccHHHHHHHHHcccccEEEEccHHHHHHHHHHccccEEEEEEEEEEEEEEEccccccHHHcccccEEEEccccccHHHHHHHHHHcccEEEccccccccccHHHHHccccccEEEEccHHHHHHHHccccEEEEcccHHHHccccHHHEEEEccccccEEEEEEEcHHHcccHHHHHHHHHHccHHHHHHHHHHHcccccEEccccc //