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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54416.1
DDBJ      :             two component transcriptional regulator, LytTR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  81/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.23.1
:237 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   151->227 3d6wB PDBj 3e-07 37.7 %
:RPS:PDB   2->130 3cz5B PDBj 1e-12 20.2 %
:RPS:PDB   149->228 3d6wB PDBj 1e-16 31.2 %
:RPS:SCOP  2->124 1p2fA2  c.23.1.1 * 4e-13 23.0 %
:HMM:SCOP  1->197 1s8nA_ c.23.1.1 * 2.6e-15 22.7 %
:RPS:PFM   149->227 PF04397 * LytTR 2e-08 32.9 %
:HMM:PFM   140->228 PF04397 * LytTR 5.6e-24 33.7 89/98  
:HMM:PFM   4->118 PF00072 * Response_reg 5.6e-13 26.9 108/112  
:BLT:SWISS 4->227 LYTT_ENTFA 1e-12 23.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54416.1 GT:GENE ACV54416.1 GT:PRODUCT two component transcriptional regulator, LytTR family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 547554..548267 GB:FROM 547554 GB:TO 548267 GB:DIRECTION + GB:PRODUCT two component transcriptional regulator, LytTR family GB:NOTE PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: smt:Smal_0116 two component transcriptional regulator, LytTR family GB:PROTEIN_ID ACV54416.1 GB:DB_XREF GI:257474096 InterPro:IPR001789 InterPro:IPR007492 LENGTH 237 SQ:AASEQ MYQVVIVEDDAAQAEIIRSMIECSPRGGELAIEHVVDAESLTARLAEEPAIDVLVMDIELGSEDANGIDLVKRYFPAGCGTQVIYVTGFVEYCTSVYRTEHLYFLVKPFAQDDLDDALSRALERLEADSSKPLSVRLGSRVVLVEPSRISYIESDRRKVRIHAGAEEIEAYASLSDLAAELPASFIQCHKSFLVNMDHVKELKADSVVLSSNQVVPVSQKRRKFVREAVFSRVQSKL GT:EXON 1|1-237:0| BL:SWS:NREP 1 BL:SWS:REP 4->227|LYTT_ENTFA|1e-12|23.6|216/242| SEG 133->144|lsvrlgsrvvlv| BL:PDB:NREP 1 BL:PDB:REP 151->227|3d6wB|3e-07|37.7|77/107| RP:PDB:NREP 2 RP:PDB:REP 2->130|3cz5B|1e-12|20.2|124/140| RP:PDB:REP 149->228|3d6wB|1e-16|31.2|80/107| RP:PFM:NREP 1 RP:PFM:REP 149->227|PF04397|2e-08|32.9|79/97|LytTR| HM:PFM:NREP 2 HM:PFM:REP 140->228|PF04397|5.6e-24|33.7|89/98|LytTR| HM:PFM:REP 4->118|PF00072|5.6e-13|26.9|108/112|Response_reg| RP:SCP:NREP 1 RP:SCP:REP 2->124|1p2fA2|4e-13|23.0|113/120|c.23.1.1| HM:SCP:REP 1->197|1s8nA_|2.6e-15|22.7|185/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 128 OP:NHOMOORG 81 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------1----------------------1------1-21----1------1----------1--2----------------------------------------------------------------------------------------------------------1----11----1----2--------------------1-1---11-----22--11--------------1-----------------------------1-111111--12123333443-3-25---2223-----4511213--113----1--1----------------------------------------------------------------------------------------------------------------------------1-1-----1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1-----------------------------------------------------------------111111111111----------------------------------------------------------------------------------------------------------------------1-1-----------------------------1-1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 214 STR:RPRED 90.3 SQ:SECSTR cEEEEEEcccHHHHHHHHHHHHTHccTTEEEEEEEccHHHHHHHHHHHcHccEEEEccccccccHHHHHHHHHHHHHcTTccEEEEEccHHHHHHHHHHTccEEEETTccTTHHHHHHHHHHTTccEEcHc##############EGGGEEEEEETTEEEEEEcccEEEEcccHHHHHHHccTTEEEEETTEEEEGGGEEEEEEEEEEETTccEEEEcTTTHHHHHHH######### PSIPRED ccEEEEEcccHHHHHHHHHHHHHccccccEEEEEEEccHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHccccccEEEEEccHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHHHHHccccEEEEEccEEEEEcHHHEEEEEEcccEEEEEEcccEEEEcccHHHHHHHcccccEEEEHHHHHHHHHHccccccEEEEEcccEEEEEHHHHHHHHHHHHHHHHccc //