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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54459.1
DDBJ      :             transcriptional regulator, LysR family
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  272/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:188 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->87 3fzvB PDBj 5e-08 44.4 %
:RPS:PDB   1->87 1b9nA PDBj 2e-17 12.8 %
:RPS:SCOP  6->87 1r7jA  a.4.5.49 * 6e-14 12.3 %
:HMM:SCOP  1->89 1ixcA1 a.4.5.37 * 5.8e-23 42.7 %
:RPS:PFM   6->61 PF00126 * HTH_1 8e-08 55.4 %
:HMM:PFM   7->61 PF00126 * HTH_1 3e-24 50.9 55/60  
:HMM:PFM   129->181 PF00196 * GerE 0.00093 26.4 53/58  
:BLT:SWISS 1->82 NAC_KLEAE 9e-12 40.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54459.1 GT:GENE ACV54459.1 GT:PRODUCT transcriptional regulator, LysR family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 606957..607523 GB:FROM 606957 GB:TO 607523 GB:DIRECTION + GB:PRODUCT transcriptional regulator, LysR family GB:NOTE PFAM: regulatory protein LysR; KEGG: mlo:mlr6097 nitrogen assimilation control protein GB:PROTEIN_ID ACV54459.1 GB:DB_XREF GI:257474139 InterPro:IPR000847 LENGTH 188 SQ:AASEQ METAYLHEFAKVAECGSFTAAARELHLTQSTLSKHVALLEREFGADLFVRDRSGVSLTEAGGVLYAQARQMEKLLRATELLVRAARDGQAAGSTAGVAAGEGAVDGSPAAAGDMALRCKCRLAAERCGLDRRELGALILYVEEHGFETIQGELALTRDEVADVLGSVYRKLGVGDKQEALDFIHSVSE GT:EXON 1|1-188:0| BL:SWS:NREP 1 BL:SWS:REP 1->82|NAC_KLEAE|9e-12|40.2|82/305| SEG 88->106|gqaagstagvaagegavdg| BL:PDB:NREP 1 BL:PDB:REP 6->87|3fzvB|5e-08|44.4|72/284| RP:PDB:NREP 1 RP:PDB:REP 1->87|1b9nA|2e-17|12.8|86/258| RP:PFM:NREP 1 RP:PFM:REP 6->61|PF00126|8e-08|55.4|56/60|HTH_1| HM:PFM:NREP 2 HM:PFM:REP 7->61|PF00126|3e-24|50.9|55/60|HTH_1| HM:PFM:REP 129->181|PF00196|0.00093|26.4|53/58|GerE| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00126|IPR000847| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00126|IPR000847| RP:SCP:NREP 1 RP:SCP:REP 6->87|1r7jA|6e-14|12.3|81/90|a.4.5.49| HM:SCP:REP 1->89|1ixcA1|5.8e-23|42.7|89/0|a.4.5.37|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 358 OP:NHOMOORG 275 OP:PATTERN -------------------------------------1------------------------------ ----11--------1----------1-----------122-----------------1--------21311---------34------------------------------------------------------122-----1---------------------1-----------------1--------1-----------------1-11---11---11------13-------------------------------11------1---------1---111---------------------------111---------1111111-1----------1-----1-111-1-----1--------------11111----1--------11111111111-11111111-511111224122311-----1-1------111111111-22--11--------------------------------1-1-22123311223-111122531111-15-5-31---------112---3--1-----1---------1--1-----1---1-1----1-1-111--22-21----------------------------11--2--1-1---11111-1-1--1-1--11-------1------2121-111111111111-111111111111111111122221---1111111111-111113-111111--1---------1---------------1-2----------------11111------1112112312---12-11-----------11-11-11--122------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------2----1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 87 STR:RPRED 46.3 SQ:SECSTR EcHHHHHHHHHHHHHccHHHHHHHHTccHHHHHHHHHHHHHHHTcccEEEccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHccc##################################################################################################### DISOP:02AL 188-189| PSIPRED ccHHHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHccccEEEccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHccccEEEEEEccHHHHHHHHHcccccEEEEEcccccccccccHHHHHHHHHHHcc //