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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54506.1
DDBJ      :             HemN domain protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  657/915 : Eukaryota  46/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:410 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->299 1oltA PDBj 5e-14 25.6 %
:RPS:PDB   13->252 3cixA PDBj 4e-10 14.5 %
:RPS:SCOP  11->373 1oltA  c.1.28.2 * 2e-38 20.1 %
:HMM:SCOP  2->388 1oltA_ c.1.28.2 * 5.8e-54 27.8 %
:RPS:PFM   267->373 PF06969 * HemN_C 1e-09 39.3 %
:HMM:PFM   266->373 PF06969 * HemN_C 1.5e-16 33.3 108/118  
:HMM:PFM   10->149 PF04055 * Radical_SAM 8.3e-08 19.5 133/166  
:BLT:SWISS 4->373 YGGW_ECOLI 1e-18 25.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54506.1 GT:GENE ACV54506.1 GT:PRODUCT HemN domain protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(673913..675145) GB:FROM 673913 GB:TO 675145 GB:DIRECTION - GB:PRODUCT HemN domain protein GB:NOTE PFAM: HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: xop:PXO_02372 putative oxygen-independent coproporphyrinogen III oxidase GB:PROTEIN_ID ACV54506.1 GB:DB_XREF GI:257474186 InterPro:IPR006638 InterPro:IPR010723 LENGTH 410 SQ:AASEQ MNELHVDLSFPYCPRRCDYCDSLVATGRVADFERYADALVRELRAAAPEARGRIVMSVRFSGGSPVLMPPKALARVMDELRNAFEVAPDADAALQATCAGLSFDALGHYRKAGITFLELGQETFDGVQHDALGLCYPMNSYIDARQLLTFCSWDGLGMSLLYGLPGQNRVNLSTSIVNAVGFGAREIALAPLRLRPGSALHERYAEHPERFDALPRKAWPTDDERLALRAAGEEQLVAGGFTRVTQHLFSADGTLRASQRARCDDVDRLGVGAGAWSKLDGVVSRSTGDLTRYLAHAEDVRAITAAADVLTPVEASCRYVAGRLFAAEGFSHTEHERRFGASLPVPLRAELERLAEAGWATCEGDRWKLTCEGGHRYDDAVRRLAAAAQAEKEAAGHRGAGASPRVAASA GT:EXON 1|1-410:0| BL:SWS:NREP 1 BL:SWS:REP 4->373|YGGW_ECOLI|1e-18|25.2|353/378| SEG 385->395|aaaaqaekeaa| BL:PDB:NREP 1 BL:PDB:REP 4->299|1oltA|5e-14|25.6|277/434| RP:PDB:NREP 1 RP:PDB:REP 13->252|3cixA|4e-10|14.5|227/345| RP:PFM:NREP 1 RP:PFM:REP 267->373|PF06969|1e-09|39.3|107/117|HemN_C| HM:PFM:NREP 2 HM:PFM:REP 266->373|PF06969|1.5e-16|33.3|108/118|HemN_C| HM:PFM:REP 10->149|PF04055|8.3e-08|19.5|133/166|Radical_SAM| GO:PFM:NREP 4 GO:PFM GO:0004109|"GO:coproporphyrinogen oxidase activity"|PF06969|IPR010723| GO:PFM GO:0005737|"GO:cytoplasm"|PF06969|IPR010723| GO:PFM GO:0006779|"GO:porphyrin biosynthetic process"|PF06969|IPR010723| GO:PFM GO:0055114|"GO:oxidation reduction"|PF06969|IPR010723| RP:SCP:NREP 1 RP:SCP:REP 11->373|1oltA|2e-38|20.1|354/436|c.1.28.2| HM:SCP:REP 2->388|1oltA_|5.8e-54|27.8|378/0|c.1.28.2|1/1|Radical SAM enzymes| OP:NHOMO 1070 OP:NHOMOORG 703 OP:PATTERN -------------------------------------------------------------------- 1---21-1-1--1----11-11----11111-1--------1-11-11---11-11-------1-1-1121-111----121-112-12211-111-----111-111112222222112111111-1111111-122211111112211111111111111122211111-11----1--1--1---11-111-----1--1---1--1-1111--1-111-1111111111111111111111111----------------------------111111111111111111111111-------------1--------11111--------1--2-11-1111211-1211-2212111--11111-112-2222111111124221112433222222222222-11-1122214111222322211222211223223222112222222211111232--------------11--------1-----121122221222222223333222233333422222221122212222132212121212212222222211121111111111111111111111111122123111-------------------------113321122212222222221222222212221-11322---11132222222223233322-2222333232233222223222222212222232222222222222222221-233233333333--1211111111111212222122111-122221111111121222222222222221222211111111111222222222222222111111111111--1-111111--------1----------------------------11--1-111121 -------------------------------------------------------------------------------------------------------1---1--2-211----11---1-111-1--111--1-11111-1---11-1--112----11--------21--1-9111-11111-1---1---1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 323 STR:RPRED 78.8 SQ:SECSTR ###EEEEEEEcccccccTTcTTcTTccccccccccHHHHHHHHHHHHHTTccEEEEEEEEEEcccGGGTTHHHHHHHHHHHTTccEHHTccEEEEEEcccccHHHHHHHHHTTccEEEcccccccHHHHHHHcTTccHHHHHHHHHHHHTTcEEEEEEccEEccTTccHHHHHHHHHHHHHHTccEEccEEccccTTcTTTTcccccHHHHHHHHHHHHHHcTTcccHHcTTHHHHHHTTTccEEccccccTTTGGGcccEEEEETTEEEEETcTTccEEEEEccTTcccccccTTTTTcccccccH############HHHHHTTccccccTTcGGG######################################################################## DISOP:02AL 410-411| PSIPRED cccEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccHHHHHHHHHHHHHHcccccccEEEEEEccccccHHHHHHHHHccccEEEEEcccccHHHHHHHcccccHHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHHHHHHccccEEEEEEEEcccccHHHHHHHHcccHHHcccHHHcccHHHHHHHHHHHHHHHHHccccEEEccccccccHHHHHHHHHcccccEEEEccccEEEEccEEEEEcccHHHHHHHHHcccccEEHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHHcccEEEEccEEEEccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc //