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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54723.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  9/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:318 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   133->182 1bibA PDBj 6e-05 22.0 %
:RPS:SCOP  139->182 1mkmA1  a.4.5.33 * 2e-05 31.8 %
:HMM:SCOP  122->185 1b1bA1 a.4.5.24 * 0.00018 31.2 %
:HMM:PFM   141->177 PF09339 * HTH_IclR 1.8e-05 35.1 37/52  
:BLT:SWISS 143->222 SLYA_WIGBR 3e-04 28.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54723.1 GT:GENE ACV54723.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(935563..936519) GB:FROM 935563 GB:TO 936519 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:NOTE KEGG: dol:Dole_0232 hypothetical protein GB:PROTEIN_ID ACV54723.1 GB:DB_XREF GI:257474403 LENGTH 318 SQ:AASEQ MDELRKYLNETLGLKIEYGEWLPDANLPLFLSRSASYARCVFEGIAFVAAKMENEDGLPDIKRVHNQLGRYTDLPVVIVSETLDARQRKALVVQGVPFVVPGVQAFLPFLAFAATSREPRRYRRGGRLSSRAQAAFVTLVAHPEVESAAELREVAGLTPSDASRALAELDEQGLVVRSKSGRSMLLERERDSGKLLRAAKPLLSSPVSGILHVERNAALNALPDAGETALAVRSMLAVPPIRRKAVSRKRLKDLSFSEVLIGEIDDNDTIELQVWTYEPLVTGGKDIDDVSLALSLADSGDERVEKELNSLFDEEDLW GT:EXON 1|1-318:0| BL:SWS:NREP 1 BL:SWS:REP 143->222|SLYA_WIGBR|3e-04|28.0|75/100| SEG 90->106|alvvqgvpfvvpgvqaf| SEG 116->131|sreprryrrggrlssr| RP:PDB:NREP 1 RP:PDB:REP 133->182|1bibA|6e-05|22.0|50/294| HM:PFM:NREP 1 HM:PFM:REP 141->177|PF09339|1.8e-05|35.1|37/52|HTH_IclR| RP:SCP:NREP 1 RP:SCP:REP 139->182|1mkmA1|2e-05|31.8|44/75|a.4.5.33| HM:SCP:REP 122->185|1b1bA1|0.00018|31.2|64/0|a.4.5.24|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 10 OP:NHOMOORG 9 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------1---1------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-----1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11----------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 57 STR:RPRED 17.9 SQ:SECSTR ####################################################################################################################################HHHHHHHHTTcccccHHHHHHHHTccHHHHHHHHHHHHHTTcccEEETTTEEEcccc################################################################################################################################# DISOP:02AL 17-18,20-20,25-26,31-31,34-34,199-200,202-202,207-207,227-227,235-235,263-263,269-270,272-272,277-278,283-283,291-291| PSIPRED cHHHHHHHHHHccEEEEcccccccccccEEEEcccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccEEEEEccccHHHccEEEEccccHHHccHHHHHHHHHHHHccccHHHHHHcccccccccEEEEEEEEcccccHHHHHHHHHccccHHHHHHHHHHHHccEEEEcccccEEEEHHHcccHHHHHHHcHHHHcccccEEEEEccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHcccHHHEEEEEEccccEEEEEEEEEccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHccc //