[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54789.1
DDBJ      :             ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  90/915 : Eukaryota  127/199 : Viruses  1/175   --->[See Alignment]
c.37.1
:614 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->146 3gplA PDBj 3e-05 37.1 %
:RPS:PDB   8->401 3e1sA PDBj 4e-19 21.3 %
:RPS:SCOP  9->169 1w36D1  c.37.1.19 * 4e-11 20.0 %
:RPS:SCOP  360->434 1w36D2  c.37.1.19 * 3e-07 25.0 %
:HMM:SCOP  6->188 1w36D1 c.37.1.19 * 7.6e-26 34.0 %
:HMM:SCOP  122->435 1w36D2 c.37.1.19 * 1.1e-38 27.3 %
:RPS:PFM   30->154 PF05970 * DUF889 6e-17 46.7 %
:HMM:PFM   30->149 PF05970 * DUF889 4e-21 35.0 120/422  
:HMM:PFM   252->398 PF05970 * DUF889 4.4e-15 34.1 126/422  
:HMM:PFM   9->40 PF02562 * PhoH 6.5e-06 50.0 32/205  
:BLT:SWISS 8->429 PIF1_DANRE 1e-36 36.2 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54789.1 GT:GENE ACV54789.1 GT:PRODUCT ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 1012147..1013991 GB:FROM 1012147 GB:TO 1013991 GB:DIRECTION + GB:PRODUCT ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein GB:NOTE KEGG: hne:HNE_3264 hypothetical protein GB:PROTEIN_ID ACV54789.1 GB:DB_XREF GI:257474469 LENGTH 614 SQ:AASEQ MEMADGDRLTPEQAEALSALRDGRNVFLSGNAGTGKSYVLNAFISDLKARNVDFLALAPTGIAALNLTDGSTIHRTLKIAPGVCAPDGPKGSRKVLDAAKVIIIDEISMCRIDLFDHVMGMISQSMTRNGAKQVVLVGDFFQLPPVVTERDSALLMKFYPGNLQGWCFKSRYWTGFDFEPHVLKTVVRQSAPDFIDNLNRARVGDASCLDYFNAHSRSSRAYLPKDTLVLCANNRIADSINRENVDALDAPKVEFTAAVTGMVNSGDKMAPERIVLCRGARVMSLVNSPQEGYVNGTQGTVTDASADAVTVKFDGADEKVRIERHRWEINKSEAIVEMDEEGRPVNRVKTAVVGAYTQIPLKLAYAITIHKSQGLTFDACCVHTKVFAEGQLYVGLSRVRSAAGLTVFPKIEPNRLIASREVVEFYDSLEHRMEEPVQIECPRRYESRVRAYIRDLMDGRDPDAPTPPALEGALENSKGGTPEPGTERPARTLEEKIGADIVARATFALKFAVSSAMSKDHLEAKMLLAGYVLDWGRAPHELYVVCKEGGYRVSASELGIRRSEIEARIAKNSGFDLGSARRQPSPSDSRPGRRKGSAKESAGRTRNTRKANKR GT:EXON 1|1-614:0| BL:SWS:NREP 1 BL:SWS:REP 8->429|PIF1_DANRE|1e-36|36.2|384/639| BL:PDB:NREP 1 BL:PDB:REP 9->146|3gplA|3e-05|37.1|124/516| RP:PDB:NREP 1 RP:PDB:REP 8->401|3e1sA|4e-19|21.3|338/517| RP:PFM:NREP 1 RP:PFM:REP 30->154|PF05970|6e-17|46.7|120/133|DUF889| HM:PFM:NREP 3 HM:PFM:REP 30->149|PF05970|4e-21|35.0|120/422|DUF889| HM:PFM:REP 252->398|PF05970|4.4e-15|34.1|126/422|DUF889| HM:PFM:REP 9->40|PF02562|6.5e-06|50.0|32/205|PhoH| RP:SCP:NREP 2 RP:SCP:REP 9->169|1w36D1|4e-11|20.0|155/348|c.37.1.19| RP:SCP:REP 360->434|1w36D2|3e-07|25.0|72/190|c.37.1.19| HM:SCP:REP 6->188|1w36D1|7.6e-26|34.0|159/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 122->435|1w36D2|1.1e-38|27.3|238/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 386 OP:NHOMOORG 218 OP:PATTERN -------------------------------------------------------------------- ---------------------1----------1111------11-----11--------------------1111211--1------12222-222---1111--11--2--------------1---111--11------1-----1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1----1---------------1-1---1-----------------12111----------11111111----------------------------------------------------------------------------11------------------------------------1-2-1---------1---1----2---------11111111-1---------1---2-----------------------------------------------------------------------------------------------------------------------------------------------------------------1111111111----------------------------------------------------------------------------------------1--------------------1------ ----3---64511-2--2111111--1111111121111111111112--22-3112X-2--212222-22232-2212222222211-3---5--222--T1--4-1---5711921-1-11111-11261-112-11-1112--1---11-1-1111111-----11-611-------------2112-----113- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-- STR:NPRED 377 STR:RPRED 61.4 SQ:SECSTR #######TccHHHHHHHHHHTTccEEEEEccTTccHHHHHHHHHHHHHHTTccEEEEEccHHHHHHHHHHHHTccEEEHHHHTEETTEEcccccccccccEEEEccGGGccHHHHHHHHTTcTTcccTcTTcEEEEEEcTTccccccEEcccHHHTTEEccEEEEEEcTTTcGGGTTccGGGccHHHHHHccEEEcccccHHHHTcHHHHHHHHHTTcccccccTTEEEEEcccTTcHHHHHHHHHHTTcGGGcEEEEcccccTTcHHHHHHHHHHHHccccccEEc###########cccEEcTTcEEEEccccTTTTccTTcEEEEEEEccccEEEEETTEEEEEcG######GGGTTEEEccEEEHHHHTTccEEEEEEGGGGccHHHHHHHHHTEEE##################################################################################################################################################################################################################### DISOP:02AL 594-594,599-599| PSIPRED ccccccccccHHHHHHHHHHHHccEEEEEccccccHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHcccccHHHHccccccccccHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHHHHcccccccEEEEEcccHHHccccccccHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHcccccccHHHHHHHcccHHHccccEEEEEcHHHHHHHccHHHHHHcccccEEEcccccccccHHHHcccccEEEccccEEEEEEEccccccccccEEEEEEccccEEEEEEcccccEEEEEEEEEcccccccEEEEcccccccccccccccEEEEEccEEEEEEEEEEEccccccccEEEEcccccHHHcEEEEEEEccccEEEEEccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHccccccccccccccccccHHHHHcccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccccEEEEHHHHccHHHHHHHHHHccccccccccccccccccccccccccccHHHccccccccccccc //