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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54887.1
DDBJ      :             Type IV secretory pathway VirB4 protein-like protein
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  69/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:1043 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   21->176 1ej6B PDBj 5e-04 12.2 %
:RPS:PDB   691->1019 1e9sL PDBj 5e-13 14.6 %
:RPS:SCOP  887->1019 1e9rA  c.37.1.11 * 9e-06 24.8 %
:HMM:SCOP  639->1026 1e9rA_ c.37.1.11 * 1.2e-34 20.2 %
:RPS:PFM   695->763 PF01935 * DUF87 2e-07 41.2 %
:HMM:PFM   695->802 PF01935 * DUF87 8e-10 24.2 99/229  
:HMM:PFM   357->436 PF11130 * TraC_F_IV 2.4e-06 20.5 78/235  
:HMM:PFM   892->956 PF10412 * TrwB_AAD_bind 0.00017 21.3 61/386  
:BLT:SWISS 81->175 OGFR_HUMAN 3e-04 37.5 %
:BLT:SWISS 513->932 Y6508_BACAN 8e-09 23.1 %
:REPEAT 3|67->94|95->123|143->172
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54887.1 GT:GENE ACV54887.1 GT:PRODUCT Type IV secretory pathway VirB4 protein-like protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(1118273..1121404) GB:FROM 1118273 GB:TO 1121404 GB:DIRECTION - GB:PRODUCT Type IV secretory pathway VirB4 protein-like protein GB:NOTE KEGG: bca:BCE_A0025 hypothetical protein GB:PROTEIN_ID ACV54887.1 GB:DB_XREF GI:257474567 LENGTH 1043 SQ:AASEQ MPAIQSAPPAAPAPSPAYRAEDIPVSAAPQPAARGAHEQVSQVSQSPEPPFAYGREEAAESPASPARDPYEDYYRQAPARPSAQPYREPAPQPARDPYEDYYRPTPGRGGQGPAARDPDGEPAASGESDAYAYGKNAYADTSRDPYEDYCRQSQTPARPSAPSYREPAPQPARDPYNDYRDAGRADDADGRGQRGQREESREDVRAEGRDARRQQKLNAKAAKARKRRERAAEKAGKKKGMKRLLPTEDYPGTLVLRADKCTQDALGYELLCEDGTVKLQQGVYSRVVEFQDASFQAARESEQREIYENWSELLNTFDNTVHLQVKILCRVIDRDAFREDTFLPPVEGDYAGNRFRRDINQIIESKVAETQQNVERRRLFIVTVEAPTCEQASPLLARATEQVMRSLKNMGVNSEEVRGNELLRIIDSITNPRDPRGFVSFEDLKVTDERGVSAIQLGYTTKDLVAPADLTKIDDTHISWNGVTGQALYLQKWAGSVRSDMISSLAELPINQVITLDMTSWEQSRAIETIESMNTDLKVQKSDYVLKHSQTMYITDEMLPTNLQDAMENARDLRDDLVSRDQKMWSLTCTTMTWADSLEDCDENSGAIQDVFRRFTCRAVPLVKLQRQGFAAMLPTGRCDIPYVRNLTTAPLAALVPFTSVELMERGGMWMGQNQTSKNFIFYNRRDAVAPNGFILGKPGRGKSVTAKNTILWTLLTDPTAEVIVLDPEREYINVAREMDGEVVQISGDSHTYINPFDLELVEGEQPLAMKVDAIMSMVEMMAKNLSPMQKTLVDRCVSRIYDRYFATHDQRDIPTLIDFYNMLNQQPEPEGRMLAVTIERYVTGQASLFNHPTNVNTHKRFVVYDIRDCADNMKGLALLILLDQTWNRIVRNRERHVRTWVFIDEMQLLFENDYAISYFDQLWTRSRKYGAIPTGITQNIERIINNEKSRLMLANSDFLVLLGQSASDAAALGEVIKLSERQVAMMRNAGPGEGLLVAGGKIIPFENRIPTDSAIYRMVTTKLDDLIQYSNEDGRGDGARRG GT:EXON 1|1-1043:0| BL:SWS:NREP 2 BL:SWS:REP 81->175|OGFR_HUMAN|3e-04|37.5|80/677| BL:SWS:REP 513->932|Y6508_BACAN|8e-09|23.1|402/644| NREPEAT 1 REPEAT 3|67->94|95->123|143->172| SEG 6->17|sappaapapspa| SEG 56->66|eeaaespaspa| SEG 180->197|rdagraddadgrgqrgqr| SEG 211->244|arrqqklnakaakarkrreraaekagkkkgmkrl| RP:PDB:NREP 2 RP:PDB:REP 21->176|1ej6B|5e-04|12.2|156/1031| RP:PDB:REP 691->1019|1e9sL|5e-13|14.6|323/426| RP:PFM:NREP 1 RP:PFM:REP 695->763|PF01935|2e-07|41.2|68/196|DUF87| HM:PFM:NREP 3 HM:PFM:REP 695->802|PF01935|8e-10|24.2|99/229|DUF87| HM:PFM:REP 357->436|PF11130|2.4e-06|20.5|78/235|TraC_F_IV| HM:PFM:REP 892->956|PF10412|0.00017|21.3|61/386|TrwB_AAD_bind| RP:SCP:NREP 1 RP:SCP:REP 887->1019|1e9rA|9e-06|24.8|125/420|c.37.1.11| HM:SCP:REP 639->1026|1e9rA_|1.2e-34|20.2|367/433|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 99 OP:NHOMOORG 71 OP:PATTERN ---------------1--------1------------------------------------------- ----3-------------------------------------13---1---1----1-------------------2---31------------------------------------------1-----------------------------------------------------------1------1---------------1------------11--------------------1----------2-----------1------------11-2--21------111-1--1--------21----11---2-1-1-11------1--1-2322-------12--41-3-11------1212------------------------------------------------------------------------1----------------------------------------------------32----------11--1---------------1-----------1-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------11---111---------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 506 STR:RPRED 48.5 SQ:SECSTR ####################EEEEEEEcccccccccGGGcGGGGccccccEEEEEEEEcTTcccccccccccccccccGGGcccccTTccccccEEcGGGHHHHHHHHHHHHHHTTccEEccccEEcccTTTTccEEEcccccccTTHHHHHcGGGcccccccHHHHHHHTccTTc###############################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################ccccEETTEEc##cGGGGGGcEEEEccTTccHHHHHHHHHHHHHHTTcEcEEEEEEETTHHHHHHccTTcEEEcTTcccccGGGGccccTHHHHTHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccHHHHHHHTTTcTTTTTTcccHHHHHHHHHHHHHHHHHcHHHHHcccccccHHHEEEEEcGGGHHHHHHHHHHHHHHHHHHTTccccTTccEEEEEEEGGGcccccccccHHHHHHHHcTTTTEEEEEEEccHHHHHcHHHHHHHHTTccEEEEccccTTcHHHHHHHHHHHcEEEEEEEccccccEEEEEEEcccHHHHTccTTEEEEEccccc#################### PSIPRED cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEcHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHHHcccccccccccccEEEcccccccccccccccEEEEcccccEEccccEEEEccEEEEEEEEEccccccccHHHHHHHcccccEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEEEccHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHccccccccccEEEEcHHHHHcccccccccccccccEEEEEEcccccEEEEccccccccEEEEEccccccHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHccEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEHHHHHHHccHHHHHHHHHHHHHHHHccEEEEEEEccHHHHHccHHHHHHHHHccEEEEEcccHHHHHHHHHHHcccHHHHHHHccccccEEEEEEccEEEEEEEEcccccEEEEEEcccHHHHHHccccccccHHHHcc 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