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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54911.1
DDBJ      :             integrase family protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  192/915 : Eukaryota  1/199 : Viruses  18/175   --->[See Alignment]
d.163.1
:357 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   171->338 2a3vB PDBj 1e-04 25.2 %
:RPS:PDB   53->352 2a3vB PDBj 2e-21 16.4 %
:RPS:SCOP  165->341 1aihA  d.163.1.1 * 6e-19 27.8 %
:HMM:SCOP  168->348 1a0pA2 d.163.1.1 * 8.7e-33 26.5 %
:RPS:PFM   194->338 PF00589 * Phage_integrase 8e-12 31.8 %
:HMM:PFM   171->340 PF00589 * Phage_integrase 1.3e-27 29.7 158/173  
:HMM:PFM   23->44 PF12286 * DUF3622 4.5e-05 50.0 22/71  
:BLT:SWISS 55->352 INT_BACSU 1e-24 29.2 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54911.1 GT:GENE ACV54911.1 GT:PRODUCT integrase family protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(1143385..1144458) GB:FROM 1143385 GB:TO 1144458 GB:DIRECTION - GB:PRODUCT integrase family protein GB:NOTE PFAM: integrase family protein; KEGG: hso:HS_0424 phage integrase GB:PROTEIN_ID ACV54911.1 GB:DB_XREF GI:257474591 InterPro:IPR002104 LENGTH 357 SQ:AASEQ MSVKLAKNGTWLAQFRCKDKFGNEVHKCKRGFATAEEAQAWEDEFIASAGCTMEMTFGEFFKVYEADLRPRLREHTWRQKEYAIKSRVLPFFANKKMDEIRTIDIVRWQNALMAPDANDGKPYSATYLRTLNNQLTAILNHAERYYGLSPNPAMRTVKMGGKEARTMNFWTKDEYLRFSDATMDDPRAFVIFEVLYWTGVREGELLALTPDSFDWKKSTMRIDKSYQRLGGRDVITDPKTPKSVRTVKMSRFLADEVRDYANHHPEIGEGDRLFPVSKHYISHAMQRGCAASGVKKIRVHDLRHSHVSLLINMGFTALAIADRMGHEATDITFRYAHLFPNVQDDMANELEEERGGF GT:EXON 1|1-357:0| BL:SWS:NREP 1 BL:SWS:REP 55->352|INT_BACSU|1e-24|29.2|288/368| BL:PDB:NREP 1 BL:PDB:REP 171->338|2a3vB|1e-04|25.2|163/320| RP:PDB:NREP 1 RP:PDB:REP 53->352|2a3vB|2e-21|16.4|286/320| RP:PFM:NREP 1 RP:PFM:REP 194->338|PF00589|8e-12|31.8|132/168|Phage_integrase| HM:PFM:NREP 2 HM:PFM:REP 171->340|PF00589|1.3e-27|29.7|158/173|Phage_integrase| HM:PFM:REP 23->44|PF12286|4.5e-05|50.0|22/71|DUF3622| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 1 RP:SCP:REP 165->341|1aihA|6e-19|27.8|151/170|d.163.1.1| HM:SCP:REP 168->348|1a0pA2|8.7e-33|26.5|166/182|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 343 OP:NHOMOORG 212 OP:PATTERN --------------------------------------------------------------1----- --1-------1-1--------1--1-11111111-111-1-111--------1---------4--------1----11-2212------1----------------------------------------------------12-1-------------------------------------3----------223232-1221---1-12211-22--211--7-11231-23-1-1121-3332--1-2192-114-1-13331122162-1-134412212-1--1--113-121-11223-431---1-441-1445111--111--1--1123222------21--231-1112----11-3-4--1-1--------------------------------------------1----------------1--1-------1--------------11-------------------------------3------------------------1-1--1-------------11----1-----------1-----------1--1211-------------1---12-1----------1------1--------1---------------1-----------------1-------1-----------------------------------------------1-----------------------------------------1------------1-----------------21-------------------------1-1-------------------------------------------------------------------1------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- -----------------------------------------------------------------------------1-----1------------1-1111---1111--1-------------1----1-1---1-1--1--------------------------------- STR:NPRED 300 STR:RPRED 84.0 SQ:SECSTR ####################################################cccHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHTTTTTccGGGccHHHHHHHHHHHHHccHTcTTcccHHHHHHHHHHHHHHHHTcccccccccccccccTTcccccccccccccHHHHHHHHHHcHHcTTcHHHHHHHHHHcccHHHHHTccGGGEETTTTEEEEccccTTccEEEEccGHHHHHccccccccccccHHHHHHcTTGGGcGGGccccEccHHHHHHHHHHHHHHHTcccccHHHHHHHHHHHHHHTTccHHHHHHHcccccHHHHHHHHHHHHTcTTTcccGGGT##### PSIPRED ccEEEccccEEEEEEEEEcccccEEEEEccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHcccccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHcccHHHEEEcccEEEEEEEEccccccEEEcccccccEEEEEEccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHcHHHHHHHHHHHHHHHccc //