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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54924.1
DDBJ      :             L-serine dehydratase, iron-sulfur-dependent, alpha subunit
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  586/915 : Eukaryota  28/199 : Viruses  0/175   --->[See Alignment]
d.58.18d.81.2e.44.1
:536 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->96 2iafA PDBj 1e-04 37.2 %
:BLT:PDB   103->208 1ygyA PDBj 1e-04 22.6 %
:RPS:PDB   19->220 3dc2A PDBj 9e-11 14.9 %
:RPS:SCOP  19->130 2iafA1  d.81.2.1 * 3e-17 31.2 %
:RPS:SCOP  147->220 1ygyA3  d.58.18.1 * 7e-12 23.0 %
:RPS:SCOP  282->526 1szqA  e.44.1.1 * 4e-12 11.6 %
:HMM:SCOP  19->140 2iafA1 d.81.2.1 * 6e-24 37.8 %
:HMM:SCOP  138->220 1psdA3 d.58.18.1 * 5.8e-14 31.3 %
:RPS:PFM   13->78 PF03315 * SDH_beta 5e-09 47.0 %
:RPS:PFM   321->523 PF03313 * SDH_alpha 4e-28 39.1 %
:HMM:PFM   314->524 PF03313 * SDH_alpha 3.5e-67 51.3 199/283  
:HMM:PFM   7->136 PF03315 * SDH_beta 9e-28 32.5 126/158  
:HMM:PFM   149->212 PF01842 * ACT 5.5e-09 25.0 64/66  
:BLT:SWISS 8->208 SDHB_PEPAS 7e-35 38.8 %
:BLT:SWISS 290->527 SDHA_BACSU 4e-36 36.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54924.1 GT:GENE ACV54924.1 GT:PRODUCT L-serine dehydratase, iron-sulfur-dependent, alpha subunit GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(1158623..1160233) GB:FROM 1158623 GB:TO 1160233 GB:DIRECTION - GB:PRODUCT L-serine dehydratase, iron-sulfur-dependent, alpha subunit GB:NOTE TIGRFAM: L-serine dehydratase, iron-sulfur- dependent, alpha subunit; L-serine dehydratase, iron- sulfur-dependent, beta subunit; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; amino acid-binding ACT domain protein; KEGG: bcb:BCB4264_A2483 L-serine dehydratase, iron- sulfur-dependent, alpha subunit GB:PROTEIN_ID ACV54924.1 GB:DB_XREF GI:257474604 InterPro:IPR002912 InterPro:IPR004642 InterPro:IPR004643 InterPro:IPR005130 InterPro:IPR005131 LENGTH 536 SQ:AASEQ MKTLGLSDVIGPIMVGPSSSHTAGALRIAYMARRLCLAEPKTVEFRLLGSFAHTLTGHGTDKALVAGMLGLAADDLRIRDSFQLAGDAGLAFSFVTLPDAEYDHPNTIDMHIVDAAGNAMSVRGESIGGGAAVIRKIDDIDVRITGESTSIVVRQRDETGVLAHIAQSISDEGVNIATTRMYRERKGDIAYTVLETDQEVDGAAKAAIEDHPAILDVRVIPGDARPGCGSVDAPDAEEALQRFAEADFGTGAALLAWCEKHGTTLSEAFLAREAALAESLGYADRSLAYLHETLDVMKCAAQRPIDEALPSMGGLIGGEARKLADLRERDGELCDDQLSCAIAYAMAVLETNASMGRIVAAPTAGSSGVLPGVLLALQRTRGLSDGDLARGLAAAAAIGYLITRNATVSGAEGGCQAEIGSAAAMAAAASVELMGGAPAQCLDAASNALTNMMGLVCDPIAGLVEEPCQKRNAAGAAVALVSAQIALAGIGNLVDFDQTVEAMRKVGRTLPFELRESALGGIAAAPTACAYCPGCN GT:EXON 1|1-536:0| BL:SWS:NREP 2 BL:SWS:REP 8->208|SDHB_PEPAS|7e-35|38.8|201/222| BL:SWS:REP 290->527|SDHA_BACSU|4e-36|36.3|237/300| SEG 133->144|virkiddidvri| SEG 265->280|lseaflareaalaesl| SEG 381->402|rglsdgdlarglaaaaaigyli| SEG 422->429|aaamaaaa| SEG 473->488|aagaavalvsaqiala| BL:PDB:NREP 2 BL:PDB:REP 19->96|2iafA|1e-04|37.2|78/136| BL:PDB:REP 103->208|1ygyA|1e-04|22.6|106/527| RP:PDB:NREP 1 RP:PDB:REP 19->220|3dc2A|9e-11|14.9|201/526| RP:PFM:NREP 2 RP:PFM:REP 13->78|PF03315|5e-09|47.0|66/156|SDH_beta| RP:PFM:REP 321->523|PF03313|4e-28|39.1|202/275|SDH_alpha| HM:PFM:NREP 3 HM:PFM:REP 314->524|PF03313|3.5e-67|51.3|199/283|SDH_alpha| HM:PFM:REP 7->136|PF03315|9e-28|32.5|126/158|SDH_beta| HM:PFM:REP 149->212|PF01842|5.5e-09|25.0|64/66|ACT| GO:PFM:NREP 3 GO:PFM GO:0003941|"GO:L-serine ammonia-lyase activity"|PF03315|IPR005131| GO:PFM GO:0006094|"GO:gluconeogenesis"|PF03315|IPR005131| GO:PFM GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|PF03315|IPR005131| RP:SCP:NREP 3 RP:SCP:REP 19->130|2iafA1|3e-17|31.2|112/140|d.81.2.1| RP:SCP:REP 147->220|1ygyA3|7e-12|23.0|74/78|d.58.18.1| RP:SCP:REP 282->526|1szqA|4e-12|11.6|241/473|e.44.1.1| HM:SCP:REP 19->140|2iafA1|6e-24|37.8|119/0|d.81.2.1|1/1|Serine metabolism enzymes domain| HM:SCP:REP 138->220|1psdA3|5.8e-14|31.3|83/0|d.58.18.1|1/1|ACT-like| OP:NHOMO 1042 OP:NHOMOORG 615 OP:PATTERN ----------------------------------------------------------------1--- 111-112-11111----11-111111111111-----1341---1-11-11-333111--11-1112111-11111111111------1111-111---1111111-1-1--------------1-----------------------------------------1----------------22222--1-2244444222242442222222224422222222222222-2222222222222224222242--22---2222222222----22222222222--2222222222222222222222222222222222-22232222222222-122244432-22-2---22-2--2242222--1-2-22111-1111-1------------111-111111-11-1121121--111111111111211111111111111--------11111-----------------------------------211111112222222111122222222122331211--11211111--11-1-11----211111-1111--------1112112111--------------11-------1111111-1111111-------2211--111112111112211112122122--1----------32222213333332333-3333333333333333332222221124433444444444434233333331-211111111111---1111111111--111111-111111----111111--1111-22223333133341111111111111-222222222322231111111111-------2--------------2---------------------------2-222-2-----1 -----------1111-1-------------------------------11111111---------------------------------1111111----111222--2------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 204 STR:RPRED 38.1 SQ:SECSTR ##################THHHHHHHHHHHHHHHTccccccEEEEEEEEGGGGcccHHHHHHHHHHHTGGGcccccccccHHHHHHHHccEEEEEEE#cccccccEEEEEEEcTTccEEEEEEEEETTTTEEEEEEETTEEEEEEcccEEEEEEEcccTTHHHHHHHHHHHTTccEEEEEEEcccccccEEEEEEEcccccHHHHHHHHHHHTccEEEEEEEE######################################################################################################################################################################################################################################################################################################################### DISOP:02AL 536-537| PSIPRED ccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEHHHcccccHHHHHHHHHHHccccccccccHHHHHcccccEEEEEEEccccccccccEEEEEEEEccccEEEEEEEEEcccEEEEEEEcccEEEccccccEEEEccccHHHHHHHHHHHHHHccccHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHccccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccEEEcccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHcccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccEEEccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHccccccc //