[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54952.1
DDBJ      :             S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  754/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
e.53.1
:361 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   6->360 1yy3A PDBj 2e-70 47.8 %
:RPS:PDB   56->172 3cykB PDBj 3e-04 23.4 %
:RPS:PDB   157->247 1aqyA PDBj 3e-07 11.1 %
:RPS:SCOP  4->360 1vkyA  e.53.1.1 * 6e-93 48.4 %
:HMM:SCOP  1->361 1wdiA_ e.53.1.1 * 4.4e-114 52.5 %
:RPS:PFM   1->232 PF02547 * Queuosine_synth 6e-55 56.8 %
:HMM:PFM   1->233 PF02547 * Queuosine_synth 1.5e-74 54.2 216/220  
:BLT:SWISS 1->361 QUEA_CLOBM 2e-93 53.1 %
:PROS 68->93|PS00217|SUGAR_TRANSPORT_2

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54952.1 GT:GENE ACV54952.1 GT:PRODUCT S-adenosylmethionine/tRNA-ribosyltransferase-iso merase GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION complement(1187044..1188129) GB:FROM 1187044 GB:TO 1188129 GB:DIRECTION - GB:PRODUCT S-adenosylmethionine/tRNA-ribosyltransferase-iso merase GB:NOTE TIGRFAM:S-adenosylmethionine/tRNA- ribosyltransferase -isomerase; PFAM: Queuosine biosynthesis protein; KEGG: tgr:Tgr7_2069 S-adenosylmethionine:tRNA ribosyltransferase-isomerase GB:PROTEIN_ID ACV54952.1 GB:DB_XREF GI:257474632 InterPro:IPR003699 InterPro:IPR005829 LENGTH 361 SQ:AASEQ MKTSDFDYDLPPELIAQEPAAERDGCRLLVMDRATGAIEDRIFRDIADYLRPNDLLIANETRVMPARLLGAKRGTGGSAEVFLLREVRDREPRTNQSALWEVLVRPGKRLKPGTGAVVDFVDARGEVALSTEIVDWAENAQKGERLARLTTPLPSLDEALHAVGHTPLPPYIKNYAGDEELYQTVYSRRESSAAAPTAGLHFTPALIERLREQGVRWETVELEVGLDTFRIVDEDDPEQHVIHTEYYTVPERTADAIAETRERGGRVIAVGTTSVRSLESAWDAEAGAVTPRDRETTSLYLLPGSQFHVVDALITNFHVPRSTLMMLVSAFSTREHIMAAYRHAIEERYRMLSFGDAMFIR GT:EXON 1|1-361:0| BL:SWS:NREP 1 BL:SWS:REP 1->361|QUEA_CLOBM|2e-93|53.1|341/341| PROS 68->93|PS00217|SUGAR_TRANSPORT_2|PDOC00190| BL:PDB:NREP 1 BL:PDB:REP 6->360|1yy3A|2e-70|47.8|312/315| RP:PDB:NREP 2 RP:PDB:REP 56->172|3cykB|3e-04|23.4|77/115| RP:PDB:REP 157->247|1aqyA|3e-07|11.1|90/283| RP:PFM:NREP 1 RP:PFM:REP 1->232|PF02547|6e-55|56.8|213/217|Queuosine_synth| HM:PFM:NREP 1 HM:PFM:REP 1->233|PF02547|1.5e-74|54.2|216/220|Queuosine_synth| GO:PFM:NREP 3 GO:PFM GO:0008616|"GO:queuosine biosynthetic process"|PF02547|IPR003699| GO:PFM GO:0016740|"GO:transferase activity"|PF02547|IPR003699| GO:PFM GO:0016853|"GO:isomerase activity"|PF02547|IPR003699| RP:SCP:NREP 1 RP:SCP:REP 4->360|1vkyA|6e-93|48.4|279/280|e.53.1.1| HM:SCP:REP 1->361|1wdiA_|4.4e-114|52.5|343/0|e.53.1.1|1/1|QueA-like| OP:NHOMO 798 OP:NHOMOORG 762 OP:PATTERN -------------------------------------------------------------------- 11111---------------------------------11---------------------------1-1--------1111211111222212221--11111112211---------------22222222222-----11121111111111111111111111111111111111111111111111111111111111111111221111111111111111111111111111111111111111111-1-11-----11--111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-----111111111111111111111111-11111111111111112111111111-11111111111111111111111111-1------------1111111-11111-----1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111111111111111111111111111111111111111111111-111111--11111111111111111111-1111111111111111111111111112111122222122211111111111-1111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111-1111111-1-------------------------1111111111111 ------------------------1-1------1-----------------------1----------------------------------------------------------------------------------------------------------------2----1------------1---------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 345 STR:RPRED 95.6 SQ:SECSTR ###cTccccccTTTccccccTTcTTccEEEccTTTcccccccTTGGGGGccTTEEEEEETTTTEEcEEEEEEccccTTcEEEEEEEcTTcc########EEEEETTGGGccTEEEEEEEEccTTcEEcccccc###TTTcccEEEEEEEEcTEccHHHHEEEETTEEEEGGGTTTTHHHHTcc#ccTTcEEEEEcTTccHHHHHHHHHHHHTTTccccHHHHcccTTcEETTTEEHHHHHHTcccccEEcHHHHHHHHHHHHTTccEEEEcTTTHHHHHHHHHTTTcccccEEEcEEcccccTTcccccccEEEEEcccTTccHHHHHHHHHcHHHHHHHHHHHHHTTccccccccEEEc# PSIPRED cccccccccccHHHHHccccccccccEEEEEEccccEEEEEEHHHHHHHcccccEEEEEcccccEEEEEEEEcccccEEEEEEEEEEcccHHHcccccEEEEEEccccccccccEEEEEEcccccccccEEEEEEEEccccccEEEEEEccccccHHHHHHHHcccccccccccccccccccccHHccccccHHcccccccccHHHHHHHHHccccEEEEEEEcccccccccccccHHHcEEEEEEEEccHHHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHccccEEEcccccEEEEEccccEEEEEEEEEccccccHHHHHHHHHHHHcHHHHHHHHHHHHHcccEEEEccccEEcc //