[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Eggerthella lenta DSM 2243 (elen0)
Gene : ACV54989.1
DDBJ      :             HI0933 family protein
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  203/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.3.1e.74.1
:424 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   46->416 2i0zA PDBj 2e-20 26.9 %
:RPS:PDB   108->183 3cesC PDBj 2e-04 13.5 %
:RPS:PDB   370->415 1e39A PDBj 2e-08 28.3 %
:RPS:SCOP  41->183,369->415 2gqfA1  c.3.1.8 * 1e-14 36.2 %
:RPS:SCOP  188->349 2gqfA2  e.74.1.1 * 3e-09 21.9 %
:HMM:SCOP  1->417 1e39A2 c.3.1.4 * 1.5e-20 33.2 %
:RPS:PFM   42->412 PF03486 * HI0933_like 5e-42 34.0 %
:HMM:PFM   1->411 PF03486 * HI0933_like 1.5e-60 30.0 383/409  
:BLT:SWISS 45->405 Y933_HAEIN 3e-17 28.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV54989.1 GT:GENE ACV54989.1 GT:PRODUCT HI0933 family protein GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 1234105..1235379 GB:FROM 1234105 GB:TO 1235379 GB:DIRECTION + GB:PRODUCT HI0933 family protein GB:NOTE PFAM: HI0933 family protein; KEGG: sun:SUN_2357 hypothetical protein GB:PROTEIN_ID ACV54989.1 GB:DB_XREF GI:257474669 InterPro:IPR004792 LENGTH 424 SQ:AASEQ MIIGGGAAGLAAAVAAADALRARGVRVGADAGADGVDVAVCEADERVGRSILATGNGRCNFSNAQVDAAAYRNAAFVGAALDELRRAGGLRGGDGADPVHAFFADLGLVWREEGEGRLYPLANKATSVLEVLRAAASDAGVREECGREAVRLDAPARKGDRFHVRFADGAVLHAEAVIVAAGGNAARALVPEGLAWEEPRAVLGPLRTDARLVKALNNIRVRCAASLVGRDGAEKACERGEVLFRDYGVSGIAVFNLSRFAEPGDTLRIDLLPQHGEAPLEELLRARLASLRERGGAGTGDDALRGMTLPAVGRAVLKAAGLHAEKPLAQRDVPALVRALKGLALEVRGVGEARQCQVHRGGFLVEAFDPRTCAARAVPGLHVVGEALDVDAPCGGYNLHWAWASGMLAGRAAAESLMEGARRA GT:EXON 1|1-424:0| BL:SWS:NREP 1 BL:SWS:REP 45->405|Y933_HAEIN|3e-17|28.2|330/401| TM:NTM 1 TM:REGION 1->21| SEG 4->40|gggaaglaaavaaadalrargvrvgadagadgvdvav| SEG 78->97|gaaldelrragglrggdgad| SEG 276->298|geapleellrarlaslrerggag| BL:PDB:NREP 1 BL:PDB:REP 46->416|2i0zA|2e-20|26.9|350/416| RP:PDB:NREP 2 RP:PDB:REP 108->183|3cesC|2e-04|13.5|74/516| RP:PDB:REP 370->415|1e39A|2e-08|28.3|46/568| RP:PFM:NREP 1 RP:PFM:REP 42->412|PF03486|5e-42|34.0|350/394|HI0933_like| HM:PFM:NREP 1 HM:PFM:REP 1->411|PF03486|1.5e-60|30.0|383/409|HI0933_like| RP:SCP:NREP 2 RP:SCP:REP 41->183,369->415|2gqfA1|1e-14|36.2|176/253|c.3.1.8| RP:SCP:REP 188->349|2gqfA2|3e-09|21.9|137/148|e.74.1.1| HM:SCP:REP 1->417|1e39A2|1.5e-20|33.2|235/0|c.3.1.4|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 229 OP:NHOMOORG 210 OP:PATTERN -------------------------------------------1-11--------------------- ------------------------------------------------------------------------------1111-------------------------------------------------1---------221--------------1-1--------11-------1------------1-1------1---1-11-----------1-1-11------111------------------------------------------1--111-11111111111111111-------------111111111--2122------12-21-11122321111-121-2222-1-11-------1--1111---------------1---11111-11111-----------1-111-11111111----1-------11111111111-11--11---------------------------------11--1111--------------------------------------------11-----1-------------1--1-----1111111-------1-------1-2-------------------11--2--11----------------1------1--1----1-1---------------------------------------------------------------------------------------------1-----1111-111----1--------11-------------1111--------1-111-----------111111111-1111111111111------1---------------------------------------------1---------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---1---1---------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 367 STR:RPRED 86.6 SQ:SECSTR ############################################ccccHHHHHTGGGTcccEEcHHHHTcTcTGGGGHHHHHHccHHHHH########HHHHHHHTTETTTccGGGcEEEEccHHHHHHHHHHHHHHHTTcEEEccEEEEEETTccEEEEEEEETTTEEEEEEccEEEEcccccTTcHHHHHHHcGGGTTccccccTTHTTccEEcTTcEEEEEEEETTTcccccTHHHHTTcEEEcTTccccccTTccHHHHHHHHHTcEEEEEHHHHHHcTTHHHHHHHTcccEEccHHHHHHHHTccHHHHHHHHHHHHHHHHHTccTTTcccccccccccccEEEEEEEEEEEEEccEEEccTTcEEcTTccEEEEEEEccTTccTTcccTTHHHHHHHHHHHHHHHHHHHHHTc##### DISOP:02AL 424-425| PSIPRED cEEcccHHHHHHHHHHHHHccccHHHHHHcccccccEEEEEEccccHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccEEEccccEEEEccccHHHHHHHHHHHHHHcccEEEEccEEEEEEEccccccEEEEEEccccEEEccEEEEEccccccHHccccccccccccccEEEEcccHHHHHHHccccccccEEEEcccccccEEEEccEEEEcccccHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccEEEcccccHHHHHHHcccccHHHccHHHHHHHccccEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccc //