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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55005.1
DDBJ      :             sugar-phosphate isomerase, RpiB/LacA/LacB family
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  508/915 : Eukaryota  60/199 : Viruses  0/175   --->[See Alignment]
c.121.1
:146 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->144 1nn4D PDBj 8e-34 44.8 %
:RPS:PDB   2->140 3c5yH PDBj 1e-14 20.6 %
:RPS:SCOP  1->144 1nn4A  c.121.1.1 * 2e-26 44.4 %
:HMM:SCOP  1->145 1uslA_ c.121.1.1 * 2.7e-54 55.9 %
:RPS:PFM   2->141 PF02502 * LacAB_rpiB 6e-38 55.7 %
:HMM:PFM   2->140 PF02502 * LacAB_rpiB 1.1e-53 54.7 139/140  
:BLT:SWISS 2->144 RPIB_ECOLI 2e-33 44.8 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55005.1 GT:GENE ACV55005.1 GT:PRODUCT sugar-phosphate isomerase, RpiB/LacA/LacB family GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 1252764..1253204 GB:FROM 1252764 GB:TO 1253204 GB:DIRECTION + GB:PRODUCT sugar-phosphate isomerase, RpiB/LacA/LacB family GB:NOTE TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: nar:Saro_2239 ribose-5-phosphate isomerase GB:PROTEIN_ID ACV55005.1 GB:DB_XREF GI:257474685 InterPro:IPR003500 InterPro:IPR004785 LENGTH 146 SQ:AASEQ MKISIASDHAGFEQKQALVGYLASKGHDVIDRGPDCDDRVDYPDYAARVAHDVVDGMAERGVLVCGTGIGMAVAANKIDGIRAANVTSPLFAALAREHNDANVVAVSGRFVDESVNREILDAFVSTSFGGGRHAGRVEKIAALENE GT:EXON 1|1-146:0| BL:SWS:NREP 1 BL:SWS:REP 2->144|RPIB_ECOLI|2e-33|44.8|143/149| BL:PDB:NREP 1 BL:PDB:REP 2->144|1nn4D|8e-34|44.8|143/159| RP:PDB:NREP 1 RP:PDB:REP 2->140|3c5yH|1e-14|20.6|136/204| RP:PFM:NREP 1 RP:PFM:REP 2->141|PF02502|6e-38|55.7|140/140|LacAB_rpiB| HM:PFM:NREP 1 HM:PFM:REP 2->140|PF02502|1.1e-53|54.7|139/140|LacAB_rpiB| GO:PFM:NREP 1 GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF02502|IPR003500| RP:SCP:NREP 1 RP:SCP:REP 1->144|1nn4A|2e-26|44.4|144/159|c.121.1.1| HM:SCP:REP 1->145|1uslA_|2.7e-54|55.9|145/157|c.121.1.1|1/1|Ribose/Galactose isomerase RpiB/AlsB| OP:NHOMO 760 OP:NHOMOORG 570 OP:PATTERN --1-------------1--------------------------------------------------- 1231111111111111111-111113111111122211111111332112213231111111122232311-------1111-1111111111111---111112111-2---------------11111111121111--1121-1-------------------1--1------------------111-111111111111111112111111111111-1344454411122222222222222222212---22--2------22-------312242222422222222222224444444443344222---422411143111111111122111311111212111111111-211121111141121--------------------111111111111---1-----1---1---11222122------------111--------1--1-1131111111111111111-111111111111111111------------1111----1111--------------1----1-1--1----------------------1-111111111111111112111111211-121111111111111111111111111----3-------1--------------------------------1-1-1--1--11111----111111-1--1-11111211111------------------------------11111111111-------------1--21---2-1-------11----------1-----------------1----------------------------------------11111111--------1-1----1-11111111111111111111111111111111 --------2111--111111-11111211----1111111111111--111-11111111111-2---------1-----------------1-1-1111--1-----21---------------------------------------------------------------------------1--11-1------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 144 STR:RPRED 98.6 SQ:SECSTR cEEEEcccGGGGGGHHHHHHHHGGGTcEEEEccccTTccccccHHHHHHHHHHHHHTccEccEEEEEcccHHHHHTTTTTccEEEcccHHHHHHHHHHTcccEEEEccTTTHHHHHHHHHHHHHcccccccccGGGHHHHHHHH## DISOP:02AL 146-147| PSIPRED cEEEEEEcHHHHHHHHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHccccEEEEEEccHHHHHHHHHHccccEEEEcHHcccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcc //