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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55022.1
DDBJ      :             tRNA pseudouridine synthase A
Swiss-Prot:             

Homologs  Archaea  27/68 : Bacteria  885/915 : Eukaryota  129/199 : Viruses  0/175   --->[See Alignment]
d.265.1
:255 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->229 2nqpD PDBj 1e-27 37.3 %
:RPS:PDB   6->255 1dj0A PDBj 4e-61 36.9 %
:RPS:SCOP  6->255 1dj0A  d.265.1.1 * 2e-61 36.9 %
:HMM:SCOP  1->255 1dj0A_ d.265.1.1 * 4.1e-69 39.8 %
:RPS:PFM   8->73 PF01416 * PseudoU_synth_1 6e-09 48.5 %
:HMM:PFM   10->110 PF01416 * PseudoU_synth_1 3.7e-10 38.0 79/105  
:HMM:PFM   151->255 PF01416 * PseudoU_synth_1 2.5e-19 33.3 99/105  
:BLT:SWISS 6->255 TRUA_BREBN 2e-47 43.2 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55022.1 GT:GENE ACV55022.1 GT:PRODUCT tRNA pseudouridine synthase A GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 1270673..1271440 GB:FROM 1270673 GB:TO 1271440 GB:DIRECTION + GB:PRODUCT tRNA pseudouridine synthase A GB:NOTE KEGG: bce:BC0163 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase GB:PROTEIN_ID ACV55022.1 GB:DB_XREF GI:257474702 InterPro:IPR001406 LENGTH 255 SQ:AASEQ MRDHTLALTLSYNGAPFSGFARQPGQTTVQGDLEDALRMLFRRDVETTCAGRTDAGVHALGQVVSFDVDDRDIAGRSLPSLRRSLNALTHDAITVREVEPKKLGFSARFDAQAREYHYHLCVDSTCPIFMKDFSWFVPGGLDITAMEAGAQYLLGEHDFKSFCMAASAEGKPTHRNVREISFHPETVMGENLMSIKVVGNAFLHSMVRTIVGTLVMVGKGQRDADWVGEVLEACDRRVAGENAPAQGLVFWRVIY GT:EXON 1|1-255:0| BL:SWS:NREP 1 BL:SWS:REP 6->255|TRUA_BREBN|2e-47|43.2|241/244| BL:PDB:NREP 1 BL:PDB:REP 4->229|2nqpD|1e-27|37.3|217/263| RP:PDB:NREP 1 RP:PDB:REP 6->255|1dj0A|4e-61|36.9|241/264| RP:PFM:NREP 1 RP:PFM:REP 8->73|PF01416|6e-09|48.5|66/112|PseudoU_synth_1| HM:PFM:NREP 2 HM:PFM:REP 10->110|PF01416|3.7e-10|38.0|79/105|PseudoU_synth_1| HM:PFM:REP 151->255|PF01416|2.5e-19|33.3|99/105|PseudoU_synth_1| GO:PFM:NREP 4 GO:PFM GO:0001522|"GO:pseudouridine synthesis"|PF01416|IPR020097| GO:PFM GO:0003723|"GO:RNA binding"|PF01416|IPR020097| GO:PFM GO:0009451|"GO:RNA modification"|PF01416|IPR020097| GO:PFM GO:0009982|"GO:pseudouridine synthase activity"|PF01416|IPR020097| RP:SCP:NREP 1 RP:SCP:REP 6->255|1dj0A|2e-61|36.9|241/264|d.265.1.1| HM:SCP:REP 1->255|1dj0A_|4.1e-69|39.8|246/264|d.265.1.1|1/1|Pseudouridine synthase| OP:NHOMO 1202 OP:NHOMOORG 1041 OP:PATTERN -----------------------1-11-111-111-1------11-111111111111111------- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111-111111111211112-1111111-11111211111111111111111111111111111111111111111111111111111111111111111-111-2222222222222211111122211111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111321122222221211211222232111-321111111121111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111112111111111111111111122222121111111111111111111111111111111111111111111111111111-111111--111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111-111111111111111111111111111111111111111111111111111111-1111111111111111------11-----11--1111111111111111 ---112--211--1--1--------------------1-11---------------------1-1111111111-1111111--1111-1211121111----2221122222231122--22134212252-22211-222223111222-1121222----211-221711112334H4431221241331322224 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 251 STR:RPRED 98.4 SQ:SECSTR ###EEEEEEEEEccTTccccccTTccccHHHHHHHHHHHHHTccccEEEcccccTTcEEEEEEEEEEEccc#cccccHHHHHHHHHHTccTTEEEEEEEEccTTccTTTTccEEEEEEEEEcccccccTTTTccEEccccccHHHHHHHHGGGcEEEEcGGGcccTTccccccEEEEEEEEEEEEEEETTTEEEEEEEEccccTTHHHHHHHHHHHHHTTcccTTHHHHHHHHccGGGcccccccTTEEEEEEEc DISOP:02AL 255-256| PSIPRED cccEEEEEEEEEccccccccccccccccHHHHHHHHHHHHccccEEEEEEEcccccHHHcccEEEEEEcccccccccHHHHHHHHHHHccccEEEEEEEEccccccccEEccEEEEEEEEEccccccHHHcccEEEccccccHHHHHHHHHHHccccccHHHHccccccccccEEEEEEEEEEEEEEEcccEEEEEEEEcHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccccccEEEEEEc //