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Eggerthella lenta DSM 2243 (elen0)
Gene : ACV55116.1
DDBJ      :             DNA polymerase III, delta prime subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  905/915 : Eukaryota  10/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:383 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->165 1xxhB PDBj 9e-24 37.2 %
:RPS:PDB   8->320 1a5tA PDBj 2e-18 19.7 %
:RPS:SCOP  5->211 1jr3A2  c.37.1.20 * 4e-38 30.2 %
:HMM:SCOP  5->213 1a5tA2 c.37.1.20 * 1.7e-51 31.1 %
:HMM:PFM   185->211 PF00627 * UBA 8.4e-08 44.4 27/37  
:HMM:PFM   32->168 PF00004 * AAA 3.1e-07 24.1 108/130  
:HMM:PFM   5->49 PF01078 * Mg_chelatase 2.2e-05 35.7 42/207  
:BLT:SWISS 5->226 DPO3X_BACSU 1e-29 37.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACV55116.1 GT:GENE ACV55116.1 GT:PRODUCT DNA polymerase III, delta prime subunit GT:DATABASE GIB01015CH01 GT:ORG elen0 GB:ACCESSION GIB01015CH01 GB:LOCATION 1376951..1378102 GB:FROM 1376951 GB:TO 1378102 GB:DIRECTION + GB:PRODUCT DNA polymerase III, delta prime subunit GB:NOTE KEGG: gbm:Gbem_3205 DNA polymerase III, delta prime subunit; TIGRFAM: DNA polymerase III, delta prime subunit; PFAM: ubiquitin-associated- domain-containing protein GB:PROTEIN_ID ACV55116.1 GB:DB_XREF GI:257474796 InterPro:IPR000449 InterPro:IPR004622 LENGTH 383 SQ:AASEQ MADAFENILGQPQVREFLRATVAQGKVSHAYLFTGPAGSNKTMAAYAFAQAVLCPKGASGPRGGNCGACDACRRIMRKKHPDVRYFAPEGAGGYLVEQIRDIVADTSMAPIQAHKKVYILDRVDLLGVQAANAFLKTLEEPPSDVVLILLARTRESVLPTILSRCQVVPFRTIPASEAAGIIVQNTGASREQARMAVEACDGSITRAVEFLKSNERLAFRTRVLEVLGCLRKADDWDAVGFASELVVLVKAPLDVARAEQEQELAENADFLAKSAIRQIEARNKRQLTAKTFESLRQLTAIVRSWLRDVMAVCAETPELVINVDARASVMEAAEATDEARAAAALAAVRRCDEAISYNVSPETCIDAMLFEIREVLYGSHSAD GT:EXON 1|1-383:0| BL:SWS:NREP 1 BL:SWS:REP 5->226|DPO3X_BACSU|1e-29|37.2|215/563| SEG 331->354|eaaeatdearaaaalaavrrcdea| BL:PDB:NREP 1 BL:PDB:REP 5->165|1xxhB|9e-24|37.2|156/364| RP:PDB:NREP 1 RP:PDB:REP 8->320|1a5tA|2e-18|19.7|310/324| HM:PFM:NREP 3 HM:PFM:REP 185->211|PF00627|8.4e-08|44.4|27/37|UBA| HM:PFM:REP 32->168|PF00004|3.1e-07|24.1|108/130|AAA| HM:PFM:REP 5->49|PF01078|2.2e-05|35.7|42/207|Mg_chelatase| RP:SCP:NREP 1 RP:SCP:REP 5->211|1jr3A2|4e-38|30.2|202/240|c.37.1.20| HM:SCP:REP 5->213|1a5tA2|1.7e-51|31.1|206/0|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1559 OP:NHOMOORG 915 OP:PATTERN -------------------------------------------------------------------- 2221222222222222222-22222222222222222222222222222222222222222222222222222222222222222222112111111-12221222212212222222222222222212222212221222222223521122222122222222244222222122212121211122222222222222222224222222222222242222222222222222222222222222222222222222222222222222212222222222222222222222222222222221222222222222222222222223323222112222222212222222222222222222111122211122222122222222122122222222222-2222211111112112222222122222112122222212222222212212222112111111111111111111111211111212221111122212211111222111111122122211122221222212221112222122222222211121222222122111221122222222222122222111111111111111-111111111112222221211222222212222222222222-222221112221-222111111111111-1111111111111111111111212211-111111111111111111111121222222222222122222222222222222222222222222121111111211122222222221222222221111111112222222222222222221211222112111221122221111111111111112-111111111111-1111111211111111211 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1----2--------------3426-52--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 319 STR:RPRED 83.3 SQ:SECSTR #cccGGGcGGGHHHHHHHHHHHHTTccccEEEEEccTTccHHHHHHHHHHHHTcccccGccTTccccccHHHHHHHHTccTTEEEEcccTTcccccHHHHHHHHHTTcccTTcccEEEEEccGGGccHHHHHHHHHHHTcccTTEEEEEEEccGGGccHHHHTTcEEEEcccccHHHHHHHHHHHccccHHHHHHHHHHTTTcHHHHHHTTccHHHHHHHHHHHHHHHHHHHcccGGGHHHHccHHHHHHHHHHHHHHHTcccccTTcHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHT############################################################### DISOP:02AL 383-384| PSIPRED cccHHHHHcccHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHHccccccccccccccccHHHHHHHHccccccEEEEEccccccccHHHHHHHHHHHHHcHHHcccEEEEEEcHHHccHHHHHHHHHHHccccccEEEEEEEccHHHccHHHHHHEEEEEcccccHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccc //